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Report for CCDS33758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33758.1 Public Homo sapiens 3 RNF123 24 110 108 CCDS HistoryNCBI Gene:63891Re-query CCDS DB by CCDS ID:33758.1Re-query CCDS DB by GeneID:63891See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327697.11 ENSP00000328287.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327697.11Link to Ensembl Protein Viewer:ENSP00000328287.6Re-query CCDS DB by Nucleotide ID:ENST00000327697Re-query CCDS DB by Protein ID:ENSP00000328287
Original member Current member NCBI NM_022064.5 NP_071347.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022064.5Link to Protein Sequence:NP_071347.2Re-query CCDS DB by Nucleotide ID:NM_022064Re-query CCDS DB by Protein ID:NP_071347Link to BLAST:NP_071347.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071347.2 1314 Q5XPI4-1 1314 100% 0 0

Chromosomal Locations for CCDS 33758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49691166 49691247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49691425 49691509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49697143 49697222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49697363 49697457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49697885 49697939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49698052 49698137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49698440 49698526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49698755 49698822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49698980 49699105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49699468 49699582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49699668 49699772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49700227 49700352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49700472 49700564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49700636 49700709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49701491 49701608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49701811 49701910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49702083 49702144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49702334 49702405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49702633 49702753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49703427 49703528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49704650 49704756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49704984 49705182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49705534 49705679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49705982 49706065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49706791 49706898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49712479 49712656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49713513 49713587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49713738 49713825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49713910 49713997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49714090 49714174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49715575 49715714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49715822 49716010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49716102 49716177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49716393 49716477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49720511 49720653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49720800 49720894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49721020 49721105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49721185 49721305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3945 nt):
ATGGCATCCAAGGGGGCCGGCATGTCTTTCTCCCGCAAGAGCTATAGGCTGACCTCAGATGCTGAGAAAT
CCAGGGTCACAGGCATTGTGCAGGAGAAGCTGCTGAATGACTACCTGAACCGCATCTTTTCCTCTTCTGA
ACATGCACCCCCAGCAGCCACCAGCAGGAAACCCCTGAACTTCCAGAACCTGCCAGAACATTTGGACCAG
TTGCTACAGGTGGACAATGAGGAGGAGGAAAGCCAGGGACAGGTTGAAGGGCGGCTTGGCCCATCCACTG
TGGTCCTGGACCACACAGGCGGCTTTGAGGGGCTTCTCCTGGTGGATGATGACCTGCTGGGGGTGATTGG
ACACAGCAACTTTGGCACCATCCGCTCTACCACATGCGTGTACAAAGGGAAATGGCTCTACGAGGTCCTC
ATCTCCTCCCAGGGGCTCATGCAGATCGGCTGGTGCACCATCAGCTGCCGCTTCAACCAGGAGGAGGGGG
TTGGAGATACACACAACTCCTATGCCTATGATGGCAACCGCGTGCGCAAGTGGAATGTGACCACAACGAA
TTATGGCAAGGCGTGGGCAGCGGGGGACATCGTGAGCTGCCTGATTGACCTGGATGATGGCACTCTGTCC
TTCTGCCTGAACGGTGTATCACTGGGCACTGCCTTTGAGAACCTGTCCAGGGGCCTGGGTATGGCCTACT
TCCCAGCCATCAGCCTCTCTTTCAAGGAGTCCGTGGCCTTCAACTTTGGCAGCCGTCCTCTGCGCTACCC
AGTGGCAGGCTACCGGCCCCTGCAGGACCCACCGAGTGCTGACCTGGTGCGGGCACAGAGGTTGCTGGGC
TGCTTCCGGGCAGTGCTGAGTGTGGAGCTGGACCCTGTGGAGGGGCGGCTGTTGGACAAGGAGAGCTCCA
AGTGGCGGTTGCGGGGCCAGCCCACCGTCCTCCTCACACTGGCCCACATCTTCCATCACTTTGCACCGCT
TCTGCGCAAGGTGTATCTGGTGGAGGCTGTGCTCATGAGCTTCTTGCTGGGCATCGTGGAGAAGGGCACA
CCCACACAGGCACAGTCCGTGGTGCACCAGGTCCTGGACCTCTTGTGGCTCTTCATGGAGGACTACGAGG
TACAAGATTGCCTCAAGCAGTTGATGATGTCTCTGCTTCGGCTGTACCGATTCTCACCCATTGTCCCAGA
CCTGGGCCTACAGATCCATTACCTGCGGCTCACTATCGCCATCCTGAGGCATGAGAAGTCCCGCAAGTTT
CTGCTTAGCAATGTCCTCTTCGACGTGCTCCGCTCCGTCGTCTTCTTTTACATCAAGAGCCCCCTGCGTG
TGGAGGAGGCCGGCCTGCAGGAGCTCATTCCCACCACCTGGTGGCCCCACTGCTCCAGTAGGGAGGGCAA
AGAGAGCACGGAGATGAAGGAGGAGACCGCAGAGGAGCGGCTGCGGCGGCGAGCCTACGAACGGGGCTGT
CAGCGGCTCAGGAAGCGCATCGAAGTGGTGGAAGAACTACAGGTCCAGATCCTGAAGCTGCTGCTGGACA
ATAAAGATGACAATGGGGGTGAAGCTTCTAGGTATATCTTCCTGACCAAGTTTCGCAAGTTTCTGCAGGA
GAACGCCAGTGGCCGGGGGAACATGCCCATGCTCTGCCCCCCTGAGTACATGGTCTGCTTCTTACACCGG
CTGATCTCTGCCCTGCGCTACTATTGGGATGAATACAAGGCTTCCAATCCTCATGCTTCCTTCAGTGAGG
AGGCCTACATCCCGCCCCAGGTCTTCTATAATGGCAAGGTGGACTACTTTGACCTGCAGCGCCTGGGGGG
CCTCCTCTCGCACCTGCGGAAGACCCTCAAAGATGACCTTGCTTCCAAAGCCAACATTGTGATCGACCCA
CTGGAGCTCCAGTCAACCGCCATGGATGACCTAGATGAGGATGAGGAGCCAGCCCCAGCTATGGCCCAGC
GCCCCATGCAGGCCCTGGCTGTTGGGGGGCCACTGCCCCTGCCCCGGCCCGGCTGGCTCAGTTCTCCAAC
TTTGGGCCGAGCCAACCGCTTCCTCAGCACAGCGGCTGTGAGCCTCATGACCCCACGGCGGCCTCTGAGC
ACCTCGGAGAAAGTGAAGGTCCGCACGCTGAGCGTGGAGCAGAGGACCCGTGAGGACATTGAAGGCAGCC
ACTGGAATGAGGGCTTGCTGCTGGGGCGGCCCCCCGAGGAGCCTGAGCAGCCCCTCACCGAGAACTCGCT
GCTGGAAGTCCTGGATGGGGCGGTCATGATGTACAACCTCAGCGTACACCAGCAGCTGGGCAAGATGGTG
GGTGTCTCCGATGATGTCAATGAATACGCTATGGCTCTGAGGGACACAGAGGACAAGCTCCGCCGGTGCC
CCAAGAGGAGGAAGGACATCCTTGCAGAGTTGACCAAGAGCCAGAAGGTTTTCTCAGAAAAGCTGGACCA
CCTGAGCCGCCGTCTTGCCTGGGTCCATGCCACTGTCTACTCCCAGGAGAAGATGCTGGACATCTACTGG
CTGCTGCGCGTCTGCCTGCGGACCATTGAGCACGGTGATCGCACAGGGTCTCTCTTTGCCTTCATGCCCG
AGTTCTACCTGAGCGTGGCCATCAACAGCTACAGTGCTCTCAAGAATTACTTTGGTCCCGTGCACAGCAT
GGAGGAGCTCCCAGGCTATGAAGAGACCCTGACCCGCCTGGCTGCCATTCTCGCCAAACACTTTGCCGAC
GCACGCATTGTGGGCACTGACATCCGAGACTCACTGATGCAGGCCCTGGCCAGCTACGTGTGCTACCCAC
ACTCCCTGCGGGCTGTGGAGCGAATCCCCGAGGAGCAGCGTATCGCCATGGTGAGGAACCTCCTGGCGCC
CTATGAGCAGCGGCCCTGGGCCCAGACCAACTGGATCCTGGTGCGGCTCTGGAGGGGCTGTGGCTTCGGG
TACCGCTATACACGGCTGCCACATCTGCTGAAAACCAAACTTGAGGACGCCAATTTGCCCAGCCTCCAGA
AGCCCTGCCCTTCCACCCTGCTGCAGCAGCACATGGCGGACCTCCTACAGCAGGGTCCTGATGTGGCACC
CAGCTTCCTCAACAGCGTCCTCAATCAGCTCAACTGGGCCTTCTCTGAATTCATTGGCATGATCCAAGAG
ATCCAGCAGGCTGCTGAGCGCCTGGAGCGGAACTTTGTGGACAGCCGGCAGCTCAAGGTATGTGCCACCT
GCTTTGACCTCTCGGTCAGCCTGCTGCGTGTCTTGGAGATGACTATCACACTGGTGCCTGAGATATTCCT
TGACTGGACCCGGCCTACCTCTGAGATGCTGCTGCGGCGTCTTGCACAGCTGCTAAACCAGGTGCTGAAC
CGGGTGACAGCTGAGAGGAACCTGTTTGATCGTGTGGTCACCCTACGGCTGCCTGGCCTAGAGAGCGTGG
ACCACTATCCCATTCTGGTGGCAGTGACGGGCATCCTGGTGCAGCTCCTGGTGCGTGGCCCAGCCTCAGA
GAGAGAGCAAGCCACATCAGTGCTCCTGGCAGATCCCTGCTTCCAGCTACGCTCAATATGCTATCTCCTG
GGACAGCCAGAGCCCCCAGCACCTGGCACTGCTCTGCCAGCCCCTGACCGGAAGCGCTTCTCCCTGCAGA
GCTATGCGGATTATATCAGTGCCGATGAGCTGGCCCAAGTGGAACAGATGCTGGCGCACCTGACCTCTGC
ATCTGCCCAGGCAGCAGCTGCCTCCCTGCCCACCAGTGAGGAGGACCTCTGCCCCATCTGCTATGCCCAC
CCCATCTCTGCTGTGTTCCAGCCCTGTGGCCACAAGTCCTGCAAAGCCTGTATCAACCAGCACCTGATGA
ACAACAAGGACTGCTTCTTCTGCAAAACCACCATCGTGTCTGTAGAGGACTGGGAGAAGGGAGCCAATAC
GAGTACTACCTCCTCAGCTGCCTAG

Translation (1314 aa):
MASKGAGMSFSRKSYRLTSDAEKSRVTGIVQEKLLNDYLNRIFSSSEHAPPAATSRKPLNFQNLPEHLDQ
LLQVDNEEEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFGTIRSTTCVYKGKWLYEVL
ISSQGLMQIGWCTISCRFNQEEGVGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLS
FCLNGVSLGTAFENLSRGLGMAYFPAISLSFKESVAFNFGSRPLRYPVAGYRPLQDPPSADLVRAQRLLG
CFRAVLSVELDPVEGRLLDKESSKWRLRGQPTVLLTLAHIFHHFAPLLRKVYLVEAVLMSFLLGIVEKGT
PTQAQSVVHQVLDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTIAILRHEKSRKF
LLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHCSSREGKESTEMKEETAEERLRRRAYERGC
QRLRKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENASGRGNMPMLCPPEYMVCFLHR
LISALRYYWDEYKASNPHASFSEEAYIPPQVFYNGKVDYFDLQRLGGLLSHLRKTLKDDLASKANIVIDP
LELQSTAMDDLDEDEEPAPAMAQRPMQALAVGGPLPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLS
TSEKVKVRTLSVEQRTREDIEGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGAVMMYNLSVHQQLGKMV
GVSDDVNEYAMALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFAD
ARIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRPWAQTNWILVRLWRGCGFG
YRYTRLPHLLKTKLEDANLPSLQKPCPSTLLQQHMADLLQQGPDVAPSFLNSVLNQLNWAFSEFIGMIQE
IQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWTRPTSEMLLRRLAQLLNQVLN
RVTAERNLFDRVVTLRLPGLESVDHYPILVAVTGILVQLLVRGPASEREQATSVLLADPCFQLRSICYLL
GQPEPPAPGTALPAPDRKRFSLQSYADYISADELAQVEQMLAHLTSASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKTTIVSVEDWEKGANTSTTSSAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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