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Report for CCDS33325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33325.1 Public Homo sapiens 2 GORASP2 24 110 108 CCDS HistoryNCBI Gene:26003Re-query CCDS DB by CCDS ID:33325.1Re-query CCDS DB by GeneID:26003See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33325.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000234160.5 ENSP00000234160.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000234160.5Link to Ensembl Protein Viewer:ENSP00000234160.4Re-query CCDS DB by Nucleotide ID:ENST00000234160Re-query CCDS DB by Protein ID:ENSP00000234160
Original member Current member NCBI NM_015530.5 NP_056345.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015530.5Link to Protein Sequence:NP_056345.3Re-query CCDS DB by Nucleotide ID:NM_015530Re-query CCDS DB by Protein ID:NP_056345Link to BLAST:NP_056345.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056345.3 452 Q9H8Y8-1 452 100% 0 0

Chromosomal Locations for CCDS 33325.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 170929341 170929403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170948350 170948430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170949539 170949742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170950204 170950290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170951328 170951458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170954650 170954782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170956436 170956559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170961663 170961749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170962839 170962946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170965790 170966130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGGTACAAG
AAAATTCCCCAGGACACAGAGCTGGTTTGGAGCCTTTCTTTGATTTTATTGTTTCTATTAATGGTTCAAG
ATTAAATAAAGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTT
ATCTATAGCAGCAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGG
GCTTATTGGGAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGGCATGTGCTGGA
GGTGGAATCAAATTCTCCTGCAGCACTGGCAGGTCTTAGACCACACAGTGATTATATAATTGGAGCAGAT
ACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAAACCATTGAAACTGT
ATGTGTACAACACAGACACTGATAACTGTCGAGAAGTGATTATTACACCAAATTCTGCATGGGGTGGAGA
AGGCAGCCTAGGATGTGGCATTGGATATGGTTATTTGCATCGAATACCTACACGCCCATTTGAGGAAGGA
AAGAAAATTTCTCTTCCAGGACAAATGGCTGGTACACCTATTACACCTCTTAAAGATGGGTTTACAGAGG
TCCAGCTGTCCTCAGTTAATCCCCCGTCTTTGTCACCACCAGGAACTACAGGAATTGAACAGAGTCTGAC
TGGACTTTCTATTAGCTCAACTCCACCAGCTGTCAGTAGTGTTCTCAGTACAGGTGTACCAACAGTACCG
TTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCTACTACATTACCAG
GTCTGATGCCTTTACCAGCAGGACTGCCCAACCTCCCCAACCTCAACCTCAACCTCCCAGCACCACACAT
CATGCCAGGGGTTGGCTTACCAGAACTTGTAAACCCAGGTCTGCCACCTCTTCCTTCCATGCCTCCCCGA
AACTTACCTGGCATTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGA
GCTCTTCTGCAGCAAGCTCAGGAGAGCTGCTGTCTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACCC
TGCCACAACTACTGCAAAGGCAGACGCTGCCTCCTCACTCACTGTGGATGTGACGCCCCCCACTGCCAAG
GCCCCCACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTTCTGCGGCTG
TGGATGCCAATGCTTCTGAGTCACCTTAA

Translation (452 aa):
MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKML
IYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGAD
TVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSLGCGIGYGYLHRIPTRPFEEG
KKISLPGQMAGTPITPLKDGFTEVQLSSVNPPSLSPPGTTGIEQSLTGLSISSTPPAVSSVLSTGVPTVP
LLPPQVNQSLTSVPPMNPATTLPGLMPLPAGLPNLPNLNLNLPAPHIMPGVGLPELVNPGLPPLPSMPPR
NLPGIAPLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAPSDPATTTAKADAASSLTVDVTPPTAK
APTTVEDRVGDSTPVSEKPVSAAVDANASESP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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