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Report for CCDS32989.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32989.1 Public Homo sapiens 19 SCGB2B2 24 110 108 CCDS HistoryNCBI Gene:284402Re-query CCDS DB by CCDS ID:32989.1Re-query CCDS DB by GeneID:284402See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32989.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379204.2 ENSP00000368502.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379204.2Link to Ensembl Protein Viewer:ENSP00000368502.2Re-query CCDS DB by Nucleotide ID:ENST00000379204Re-query CCDS DB by Protein ID:ENSP00000368502
Original member Current member EBI ENST00000601241.6 ENSP00000469876.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000601241.6Link to Ensembl Protein Viewer:ENSP00000469876.1Re-query CCDS DB by Nucleotide ID:ENST00000601241Re-query CCDS DB by Protein ID:ENSP00000469876
Original member Current member NCBI NM_001025591.4 NP_001020762.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001025591.4Link to Protein Sequence:NP_001020762.1Re-query CCDS DB by Nucleotide ID:NM_001025591Re-query CCDS DB by Protein ID:NP_001020762Link to BLAST:NP_001020762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020762.1 96 Q4G0G5 96 100% 0 0

Chromosomal Locations for CCDS 32989.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 34593555 34593599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34594175 34594359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34594503 34594563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (291 nt):
ATGAGGGTGACATCCGCCACCTGTGCTCTTCTGCTGGCTCTGATCTGCAGCGTCCAGCTGGGGGATGCCT
GCCTGGATATCGATAAACTGCTTGCGAATGTTGTGTTTGATGTGTCCCAAGACCTCCTGAAGGAGGAGCT
TGCTCGTTACAACCCCAGTCCCCTGACAGAGGAGTCCTTCCTCAATGTCCAGCAATGCTTTGCCAATGTC
TCCGTGACAGAAAGATTTGCTCATTCAGTTGTTATTAAGAAGATCCTTCAGAGCAACGATTGCATAGAAG
CAGCCTTCTGA

Translation (96 aa):
MRVTSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLNVQQCFANV
SVTERFAHSVVIKKILQSNDCIEAAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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