NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32462.1 Public Homo sapiens 16 ZNF319 24 110 108 CCDS HistoryNCBI Gene:57567Re-query CCDS DB by CCDS ID:32462.1Re-query CCDS DB by GeneID:57567See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32462.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299237.3 ENSP00000299237.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299237.3Link to Ensembl Protein Viewer:ENSP00000299237.2Re-query CCDS DB by Nucleotide ID:ENST00000299237Re-query CCDS DB by Protein ID:ENSP00000299237
Original member Current member NCBI NM_001384365.1 NP_001371294.1 Accepted alive Link to Nucleotide Sequence:NM_001384365.1Link to Protein Sequence:NP_001371294.1Re-query CCDS DB by Nucleotide ID:NM_001384365Re-query CCDS DB by Protein ID:NP_001371294Link to BLAST:NP_001371294.1
Original member Current member NCBI NM_001384366.1 NP_001371295.1 Accepted alive Link to Nucleotide Sequence:NM_001384366.1Link to Protein Sequence:NP_001371295.1Re-query CCDS DB by Nucleotide ID:NM_001384366Re-query CCDS DB by Protein ID:NP_001371295Link to BLAST:NP_001371295.1
Original member Current member NCBI NM_001384367.1 NP_001371296.1 Accepted alive Link to Nucleotide Sequence:NM_001384367.1Link to Protein Sequence:NP_001371296.1Re-query CCDS DB by Nucleotide ID:NM_001384367Re-query CCDS DB by Protein ID:NP_001371296Link to BLAST:NP_001371296.1
Original member Current member NCBI NM_020807.3 NP_065858.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020807.3Link to Protein Sequence:NP_065858.1Re-query CCDS DB by Nucleotide ID:NM_020807Re-query CCDS DB by Protein ID:NP_065858Link to BLAST:NP_065858.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371294.1 582 Q9P2F9 582 100% 0 0
NP_001371295.1 582 Q9P2F9 582 100% 0 0
NP_001371296.1 582 Q9P2F9 582 100% 0 0
NP_065858.1 582 Q9P2F9 582 100% 0 0

Chromosomal Locations for CCDS 32462.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57996517 57998265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1749 nt):
ATGTCGGAAAGCTGGCAACAGCCGCCACAGACGCAGCCGCAGCAGCCACAGCCACCGCAGCCTCAGCACC
ATGCAGAGCCACCGCCAGCCCTGGCAGAGCACACGCTGCCTCCGGGCACGGCGGAGAACCCCCTGGGCTG
TGCCGTCTATGGCATCCTCCTGCAGCCAGACCCCGGCCTGCAGCCCCCACAACACGCACCCCTGCAGGCA
GCAGGAGAGCCAGGCCCCAAATGTGGCGTGTGTGGTCACGACCTGGCGCACCTGTCCAGTCCGCATGAGC
ACCAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCAC
TGACCTGCTGGAGCACCAGTGCGTGCAGGCTGAGCAGAAGCCCTTCGTCTGTGGGGTCTGCAAGATGGGC
TTCTCACTACTCACCTCACTGGCACAGCACCACAGCTCCCACAGTGGCCTGGTGAAGTGTTCCATCTGTG
AAAAGACCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGCTTCCCGCAGCACC
CGCGCCTTCCACTGTCACCCCTGCTGAACAGGCCGACAAGCCCTACAGCTGCCCCATCTGCCAAAAGCCC
TTCAAGCACCTGTCGGAGCTCTCTCGGCATGAGCGGATCCACACCGGTGAGAAGCCCTACAAGTGCACGC
TGTGTGACAAAAGCTTCAGCCAGTCGTCGCACCTGGTGCACCACAAGCGCACGCACAGCTCCGAGCGGCC
CTACAAGTGCGCAGTCTGCGAGAAGACCTTCAAGCACCGCTCTCACCTGGTGCGCCACATGTACGCGCAC
TCGGGCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGC
AGCACCCGTGCACGCCAAGTGGGGAGCGGCCCTTCCGCTGCGGCGAGTGCCAGAAGGCCTTCAAGCGGCC
CTCGGACCTGCGGCAGCATGAGCGCACACACAGCGCCGAGCGGCCCTTCAAGTGCGACCTGTGCCCCATG
GGCTTCAAGCAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACCGAGGAGCCCTTCAAATGCG
GCCTATGTGAGAAGGGCTTTGGGCAGCCCAGCCACCTGCTCTACCACCAGCACGTGCACACCCTCGAGAC
TCTCTTCAAGTGCCCCGTGTGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGCTGCGGCACAAGTGCCTG
CCCGGCGCGGCCGAGCGGCCCTTCAAGTGCCCTGTGTGCAACAAGGCCTACAAGCGCGCGTCGGCCCTGC
AGAAGCACCAGCTGGCCCACTGTGCGGCGGCAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCCGCTT
CTTCTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGCCCGCGAGAAGCCACTCAAGTGCCCAGAC
TGCGAGAAACGCTTCAAGTACGCGTCAGACCTGCAGCGGCACCGGCGGGTACACACAGGCGAGAAGCCCT
ACAAGTGCCCCAACTGCGACAAGGCCTTCAAGCAGCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGC
CCGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGCCTTGTTGCAGGAGCAC
AGCGCGCAGCACAGTGCCGCCGCCGCGGCAGCGGAGGGCGCCTACCAGGTAGCCGCCTGCCTGCCCTGA

Translation (582 aa):
MSESWQQPPQTQPQQPQPPQPQHHAEPPPALAEHTLPPGTAENPLGCAVYGILLQPDPGLQPPQHAPLQA
AGEPGPKCGVCGHDLAHLSSPHEHQCLAGHDRSFQCTQCLKIFHQATDLLEHQCVQAEQKPFVCGVCKMG
FSLLTSLAQHHSSHSGLVKCSICEKTYKPAEAAEPATTAAPSLPAAPAPSTVTPAEQADKPYSCPICQKP
FKHLSELSRHERIHTGEKPYKCTLCDKSFSQSSHLVHHKRTHSSERPYKCAVCEKTFKHRSHLVRHMYAH
SGEHHLFRCNVCELHFKESSELLQHPCTPSGERPFRCGECQKAFKRPSDLRQHERTHSAERPFKCDLCPM
GFKQQYALMRHRRTHKTEEPFKCGLCEKGFGQPSHLLYHQHVHTLETLFKCPVCQKGFDQSAELLRHKCL
PGAAERPFKCPVCNKAYKRASALQKHQLAHCAAAEKPLRCTLCERRFFSSSEFVQHRCDPAREKPLKCPD
CEKRFKYASDLQRHRRVHTGEKPYKCPNCDKAFKQREHLNKHQGVHAREQQFKCVWCGERFLDVALLQEH
SAQHSAAAAAAEGAYQVAACLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH