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Report for CCDS32281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32281.1 Public Homo sapiens 15 LARP6 24 110 108 CCDS HistoryNCBI Gene:55323Re-query CCDS DB by CCDS ID:32281.1Re-query CCDS DB by GeneID:55323See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32281.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299213.10 ENSP00000299213.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299213.10Link to Ensembl Protein Viewer:ENSP00000299213.7Re-query CCDS DB by Nucleotide ID:ENST00000299213Re-query CCDS DB by Protein ID:ENSP00000299213
Original member Current member NCBI NM_018357.4 NP_060827.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018357.4Link to Protein Sequence:NP_060827.2Re-query CCDS DB by Nucleotide ID:NM_018357Re-query CCDS DB by Protein ID:NP_060827Link to BLAST:NP_060827.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060827.2 491 Q9BRS8-1 491 100% 0 0

Chromosomal Locations for CCDS 32281.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 70832052 70833116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70836295 70836505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70853889 70854088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGGCCCAGTCCGGCGGGGAGGCTCGGCCCGGGCCCAAGACGGCGGTGCAGATCCGCGTCGCCATCCAGG
AGGCCGAGGACGTGGACGAGTTGGAGGACGAGGAGGAGGGGGCGGAGACTCGGGGCGCCGGGGACCCGGC
CCGGTACCTCAGCCCCGGCTGGGGCAGCGCGAGCGAGGAGGAGCCGAGCCGCGGGCACAGTGGCACCACT
GCAAGTGGAGGTGAGAACGAGCGTGAGGACCTGGAGCAGGAGTGGAAGCCCCCGGATGAGGAGTTGATCA
AGAAACTGGTGGATCAGATCGAATTCTACTTTTCTGATGAAAACCTGGAGAAGGACGCCTTTTTGCTAAA
ACACGTGAGGAGGAACAAGCTGGGATATGTGAGCGTTAAGCTACTCACATCCTTCAAAAAGGTGAAACAT
CTTACACGGGACTGGAGAACCACAGCACATGCTTTGAAGTATTCAGTGGTCCTTGAGTTGAATGAGGACC
ACCGGAAGGTGAGGAGGACCACCCCCGTCCCACTGTTCCCCAACGAGAACCTCCCCAGCAAGATGCTCCT
GGTCTATGATCTCTACTTGTCTCCTAAGCTGTGGGCTCTGGCCACCCCCCAGAAGAATGGAAGGGTGCAA
GAGAAGGTGATGGAACACCTGCTCAAGCTTTTTGGGACTTTTGGAGTCATCTCATCAGTGCGGATCCTCA
AACCTGGGAGAGAGCTGCCCCCTGACATCCGGAGGATCAGCAGCCGCTACAGCCAAGTGGGGACCCAGGA
GTGCGCCATCGTGGAGTTCGAGGAGGTGGAAGCAGCCATCAAAGCCCATGAGTTCATGATCACAGAATCT
CAGGGCAAAGAGAACATGAAAGCTGTCCTGATTGGTATGAAGCCACCCAAAAAGAAACCTGCCAAAGACA
AAAATCATGACGAGGAGCCCACTGCGAGCATCCACCTGAACAAGTCCCTGAACAAGAGAGTCGAGGAGCT
TCAGTACATGGGTGATGAGTCTTCTGCCAACAGCTCCTCTGACCCCGAGAGCAACCCCACATCCCCTATG
GCGGGCCGACGGCACGCGGCCACCAACAAGCTCAGCCCGTCTGGCCACCAGAATCTCTTTCTGAGTCCAA
ATGCCTCCCCGTGCACAAGTCCTTGGAGCAGCCCCTTGGCCCAACGCAAAGGCGTTTCCAGAAAGTCCCC
ACTGGCGGAGGAAGGTAGACTGAACTGCAGCACCAGCCCTGAGATCTTCCGCAAGTGTATGGATTATTCC
TCTGACAGCAGCGTCACTCCCTCTGGCAGCCCCTGGGTCCGGAGGCGTCGCCAAGCCGAGATGGGGACCC
AGGAGAAAAGCCCCGGTACGAGTCCCCTGCTCTCCCGGAAGATGCAGACTGCAGATGGGCTACCCGTAGG
GGTGCTGAGGTTGCCCAGGGGTCCTGACAACACCAGAGGATTTCATGGCCATGAGAGGAGCAGGGCCTGT
GTATAA

Translation (491 aa):
MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHSGTT
ASGGENEREDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKH
LTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQ
EKVMEHLLKLFGTFGVISSVRILKPGRELPPDIRRISSRYSQVGTQECAIVEFEEVEAAIKAHEFMITES
QGKENMKAVLIGMKPPKKKPAKDKNHDEEPTASIHLNKSLNKRVEELQYMGDESSANSSSDPESNPTSPM
AGRRHAATNKLSPSGHQNLFLSPNASPCTSPWSSPLAQRKGVSRKSPLAEEGRLNCSTSPEIFRKCMDYS
SDSSVTPSGSPWVRRRRQAEMGTQEKSPGTSPLLSRKMQTADGLPVGVLRLPRGPDNTRGFHGHERSRAC
V


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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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