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Report for CCDS32191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32191.1 Public Homo sapiens 15 LPCAT4 24 110 108 CCDS HistoryNCBI Gene:254531Re-query CCDS DB by CCDS ID:32191.1Re-query CCDS DB by GeneID:254531See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32191.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314891.11 ENSP00000317300.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314891.11Link to Ensembl Protein Viewer:ENSP00000317300.6Re-query CCDS DB by Nucleotide ID:ENST00000314891Re-query CCDS DB by Protein ID:ENSP00000317300
Original member Current member NCBI NM_153613.3 NP_705841.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153613.3Link to Protein Sequence:NP_705841.2Re-query CCDS DB by Nucleotide ID:NM_153613Re-query CCDS DB by Protein ID:NP_705841Link to BLAST:NP_705841.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705841.2 524 Q643R3 524 100% 0 0

Chromosomal Locations for CCDS 32191.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34359127 34359302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34359589 34359745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34360111 34360209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34361400 34361532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34362196 34362321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34362573 34362655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34362782 34362836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34363422 34363456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34363661 34363719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34364013 34364073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34364194 34364306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34365008 34365228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34365559 34365701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34366987 34367100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGAGCCAGGGAAGTCCGGGGGACTGGGCCCCCCTAGATCCCACCCCCGGACCCCCAGCATCCCCCAACC
CCTTCGTGCATGAGTTACATCTCTCTCGCCTCCAGAGGGTTAAGTTCTGCCTCCTGGGGGCATTGCTGGC
CCCCATCCGAGTGCTTCTGGCCTTTATCGTCCTCTTTCTCCTCTGGCCCTTTGCCTGGCTTCAAGTGGCC
GGTCTTAGTGAGGAGCAGCTTCAGGAGCCAATTACAGGATGGAGGAAGACTGTGTGCCACAACGGGGTGC
TAGGCCTGAGCCGCCTGCTGTTTTTCCTGCTGGGCTTCCTCCGGATTCGCGTTCGTGGCCAGCGAGCCTC
TCGCCTTCAAGCCCCTGTCCTTGTTGCTGCCCCACACTCCACTTTCTTTGACCCCATTGTTCTGCTGCCC
TGTGACCTGCCCAAAGTTGTGTCCCGAGCTGAGAACCTTTCCGTTCCTGTCATTGGAGCCCTTCTTCGAT
TCAACCAAGCCATCCTGGTATCCCGGCATGACCCGGCTTCTCGACGCAGAGTGGTGGAGGAGGTCCGAAG
GCGGGCCACCTCAGGAGGCAAGTGGCCGCAGGTGCTATTCTTTCCTGAGGGCACCTGTTCCAACAAGAAG
GCTTTGCTTAAGTTCAAACCAGGAGCCTTCATCGCAGGGGTGCCTGTGCAGCCTGTCCTCATCCGCTACC
CCAACAGTCTGGACACCACCAGCTGGGCATGGAGGGGTCCTGGAGTACTCAAAGTCCTCTGGCTCACAGC
CTCTCAGCCCTGCAGCATTGTGGATGTGGAGTTCCTTCCTGTGTATCACCCCAGCCCTGAGGAGAGCAGG
GACCCCACCCTCTATGCCAACAATGTTCAGAGGGTCATGGCACAGGCTCTGGGCATTCCAGCCACCGAAT
GTGAGTTTGTAGGGAGCTTACCTGTGATTGTGGTGGGCCGGCTGAAGGTGGCGTTGGAACCACAGCTCTG
GGAACTGGGAAAAGTGCTTCGGAAGGCTGGGCTGTCCGCTGGCTATGTGGACGCTGGGGCAGAGCCAGGC
CGGAGTCGAATGATCAGCCAGGAAGAGTTTGCCAGGCAGCTACAGCTCTCTGATCCTCAGACGGTGGCTG
GTGCCTTTGGCTACTTCCAGCAGGATACCAAGGGTTTGGTGGACTTCCGAGATGTGGCCCTTGCACTAGC
AGCTCTGGATGGGGGCAGGAGCCTGGAAGAGCTAACTCGTCTGGCCTTTGAGCTCTTTGCTGAAGAGCAA
GCAGAGGGTCCCAACCGCCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGCTGCTGGGTTCAC
CCCACCCTGCTGCCACAGCTTTGCATGCTGAGCTGTGCCAGGCAGGATCCAGCCAAGGCCTCTCCCTCTG
TCAGTTCCAGAACTTCTCCCTCCATGACCCACTCTATGGGAAACTCTTCAGCACCTACCTGCGCCCCCCA
CACACCTCTCGAGGCACCTCCCAGACACCAAATGCCTCATCCCCAGGCAACCCCACTGCTCTGGCCAATG
GGACTGTGCAAGCACCCAAGCAGAAGGGAGACTGA

Translation (524 aa):
MSQGSPGDWAPLDPTPGPPASPNPFVHELHLSRLQRVKFCLLGALLAPIRVLLAFIVLFLLWPFAWLQVA
GLSEEQLQEPITGWRKTVCHNGVLGLSRLLFFLLGFLRIRVRGQRASRLQAPVLVAAPHSTFFDPIVLLP
CDLPKVVSRAENLSVPVIGALLRFNQAILVSRHDPASRRRVVEEVRRRATSGGKWPQVLFFPEGTCSNKK
ALLKFKPGAFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWLTASQPCSIVDVEFLPVYHPSPEESR
DPTLYANNVQRVMAQALGIPATECEFVGSLPVIVVGRLKVALEPQLWELGKVLRKAGLSAGYVDAGAEPG
RSRMISQEEFARQLQLSDPQTVAGAFGYFQQDTKGLVDFRDVALALAALDGGRSLEELTRLAFELFAEEQ
AEGPNRLLYKDGFSTILHLLLGSPHPAATALHAELCQAGSSQGLSLCQFQNFSLHDPLYGKLFSTYLRPP
HTSRGTSQTPNASSPGNPTALANGTVQAPKQKGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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