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Report for CCDS31869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31869.1 Public Homo sapiens 12 POC1B 24 110 108 CCDS HistoryNCBI Gene:282809Re-query CCDS DB by CCDS ID:31869.1Re-query CCDS DB by GeneID:282809See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313546.8 ENSP00000323302.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313546.8Link to Ensembl Protein Viewer:ENSP00000323302.3Re-query CCDS DB by Nucleotide ID:ENST00000313546Re-query CCDS DB by Protein ID:ENSP00000323302
Original member Current member NCBI NM_172240.3 NP_758440.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_172240.3Link to Protein Sequence:NP_758440.1Re-query CCDS DB by Nucleotide ID:NM_172240Re-query CCDS DB by Protein ID:NP_758440Link to BLAST:NP_758440.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758440.1 478 Q8TC44-1 478 100% 0 0

Chromosomal Locations for CCDS 31869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 89421153 89421257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89425161 89425379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89459638 89459718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89466770 89466922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89467617 89467685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89470361 89470494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89471614 89471729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89472168 89472275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89491936 89492115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89497171 89497342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89525120 89525204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 89525881 89525895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGGCCTCAGCCACGGAGGACCCCGTTCTGGAGCGTTATTTCAAAGGCCACAAAGCTGCGATCACCTCCT
TGGACCTCAGCCCCAACGGCAAGCAACTTGCTACTGCTTCTTGGGATACCTTTCTCATGCTATGGAATTT
CAAGCCACATGCTAGAGCTTACAGATATGTGGGTCACAAGGATGTTGTAACCAGCGTGCAGTTTTCTCCA
CATGGAAACTTATTGGCGTCTGCCTCACGAGACAGAACCGTGAGACTCTGGATTCCTGATAAGAGAGGAA
AATTCTCAGAATTTAAAGCTCATACAGCTCCAGTTCGAAGTGTAGACTTTTCAGCTGATGGCCAGTTTCT
AGCTACAGCTTCTGAAGACAAATCCATAAAAGTATGGAGCATGTATCGCCAGCGCTTCCTGTATTCCTTG
TATCGACATACACACTGGGTACGCTGTGCCAAATTTTCACCCGATGGAAGACTAATTGTGTCATGTAGTG
AGGATAAAACTATTAAAATTTGGGATACCACAAATAAGCAATGTGTTAATAACTTCTCAGATTCCGTTGG
ATTTGCAAATTTTGTGGACTTTAACCCTAGTGGTACATGCATAGCTTCAGCAGGTTCTGATCAAACTGTG
AAAGTCTGGGATGTAAGAGTGAACAAATTACTACAGCATTACCAAGTTCACAGCGGTGGAGTTAATTGCA
TATCATTCCATCCTTCGGGTAACTATCTCATCACAGCTTCTTCAGATGGTACCCTTAAGATTCTGGACCT
CTTAGAAGGAAGGCTCATCTATACACTTCAAGGACATACGGGACCTGTCTTTACTGTTTCATTTTCAAAA
GGTGGAGAGCTATTTGCATCAGGAGGTGCAGACACACAGGTCTTATTATGGAGGACTAACTTTGATGAAT
TGCATTGTAAAGGTCTTACCAAAAGAAATCTCAAAAGATTACATTTTGATTCACCACCACATCTTCTTGA
TATCTACCCAAGAACACCACATCCCCATGAGGAAAAAGTTGAGACTGTAGAAATTAATCCAAAGCTTGAG
GTAATCGATTTGCAGATCTCTACTCCCCCTGTTATGGATATCCTTTCTTTTGATTCTACCACAACAACAG
AAACCAGTGGTAGGACTCTGCCAGACAAGGGTGAAGAGGCCTGTGGATATTTCTTGAACCCTTCCTTAAT
GTCACCAGAATGTTTGCCAACAACCACGAAAAAGAAAACAGAAGACATGAGTGACCTCCCCTGTGAAAGT
CAAAGGAGCATACCTCTCGCTGTGACTGATGCTTTAGAGCATATTATGGAACAACTCAATGTTTTGACAC
AGACTGTTTCAATCTTGGAGCAGCGACTGACTTTGACAGAGGATAAGCTGAAAGACTGCCTTGAAAATCA
GCAAAAGCTTTTCAGTGCTGTCCAACAGAAAAGCTGA

Translation (478 aa):
MASATEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP
HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSL
YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTV
KVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK
GGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLE
VIDLQISTPPVMDILSFDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTEDMSDLPCES
QRSIPLAVTDALEHIMEQLNVLTQTVSILEQRLTLTEDKLKDCLENQQKLFSAVQQKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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