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Report for CCDS31203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31203.1 Public Homo sapiens 10 ASAH2B 24 110 108 CCDS HistoryNCBI Gene:653308Re-query CCDS DB by CCDS ID:31203.1Re-query CCDS DB by GeneID:653308See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31203.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374006.1 ENSP00000363118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374006.1Link to Ensembl Protein Viewer:ENSP00000363118.1Re-query CCDS DB by Nucleotide ID:ENST00000374006Re-query CCDS DB by Protein ID:ENSP00000363118
Original member Current member EBI ENST00000643851.1 ENSP00000495463.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643851.1Link to Ensembl Protein Viewer:ENSP00000495463.1Re-query CCDS DB by Nucleotide ID:ENST00000643851Re-query CCDS DB by Protein ID:ENSP00000495463
Original member Current member NCBI NM_001079516.4 NP_001072984.1 Accepted alive Link to Nucleotide Sequence:NM_001079516.4Link to Protein Sequence:NP_001072984.1Re-query CCDS DB by Nucleotide ID:NM_001079516Re-query CCDS DB by Protein ID:NP_001072984Link to BLAST:NP_001072984.1
Original member Current member NCBI NM_001321957.2 NP_001308886.1 Accepted alive Link to Nucleotide Sequence:NM_001321957.2Link to Protein Sequence:NP_001308886.1Re-query CCDS DB by Nucleotide ID:NM_001321957Re-query CCDS DB by Protein ID:NP_001308886Link to BLAST:NP_001308886.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001072984.1 165 P0C7U1-1 165 100% 0 0
NP_001308886.1 165 P0C7U1-1 165 100% 0 0

Chromosomal Locations for CCDS 31203.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 50742925 50743010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50745202 50745274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50749343 50749402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50752468 50752556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 50754551 50754740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (498 nt):
ATGAGGCAGCATCGACAATTTATGGACCGCACGCATTATCTGCTTACATTCAGCTCTTCAGAAACCTTGC
TAAGGCTATTGCTACGTATTGTGGATAGAGCACCAAAAGGCAGAACTTTCGGGGATGTCCTGCAGCCAGC
AAAACCTGAATACAGAGTGGGGGAAGTTGCTGAAGTTATATTTGTAGGTGCTAACCCGAAGAATTCAGTA
CAAAACCAGACCCATCAGACCTTCCTCACTGTGGAGAAATATGAGGCTACTTCAACATCGTGGCAGATAG
TGTGTAATGATGCCTCCTGGGAGACTCGTTTTTATTGGCACAAGGGACTCCTGGGTCTGAGTAATGCAAC
AGTGGAATGGCATATTCCAGACACTGCCCAGCCTGGAATCTACAGAATAAGATATTTTGGACACAATCGG
AAGCAGGACATTCTGAAGCCTGCTGTCATACTTTCATTTGAAGGCACTTCCCCGGCTTTTGAAGTTGTAA
CTATTTAG

Translation (165 aa):
MRQHRQFMDRTHYLLTFSSSETLLRLLLRIVDRAPKGRTFGDVLQPAKPEYRVGEVAEVIFVGANPKNSV
QNQTHQTFLTVEKYEATSTSWQIVCNDASWETRFYWHKGLLGLSNATVEWHIPDTAQPGIYRIRYFGHNR
KQDILKPAVILSFEGTSPAFEVVTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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