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Report for CCDS2990.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2990.1 Public Homo sapiens 3 ADPRH 24 110 108 CCDS HistoryNCBI Gene:141Re-query CCDS DB by CCDS ID:2990.1Re-query CCDS DB by GeneID:141See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2990.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357003.8 ENSP00000349496.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357003.8Link to Ensembl Protein Viewer:ENSP00000349496.3Re-query CCDS DB by Nucleotide ID:ENST00000357003Re-query CCDS DB by Protein ID:ENSP00000349496
Original member Current member EBI ENST00000465513.1 ENSP00000417430.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000465513.1Link to Ensembl Protein Viewer:ENSP00000417430.1Re-query CCDS DB by Nucleotide ID:ENST00000465513Re-query CCDS DB by Protein ID:ENSP00000417430
Original member Current member EBI ENST00000478927.5 ENSP00000417528.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000478927.5Link to Ensembl Protein Viewer:ENSP00000417528.1Re-query CCDS DB by Nucleotide ID:ENST00000478927Re-query CCDS DB by Protein ID:ENSP00000417528
Original member Current member EBI ENST00000478399.5 ENSP00000420200.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000478399.5Link to Ensembl Protein Viewer:ENSP00000420200.1Re-query CCDS DB by Nucleotide ID:ENST00000478399Re-query CCDS DB by Protein ID:ENSP00000420200
Original member Current member NCBI NM_001125.4 NP_001116.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001125.4Link to Protein Sequence:NP_001116.1Re-query CCDS DB by Nucleotide ID:NM_001125Re-query CCDS DB by Protein ID:NP_001116Link to BLAST:NP_001116.1
Original member Current member NCBI NM_001291949.2 NP_001278878.1 Accepted alive Link to Nucleotide Sequence:NM_001291949.2Link to Protein Sequence:NP_001278878.1Re-query CCDS DB by Nucleotide ID:NM_001291949Re-query CCDS DB by Protein ID:NP_001278878Link to BLAST:NP_001278878.1
Original member Current member NCBI NM_001371092.1 NP_001358021.1 Accepted alive Link to Nucleotide Sequence:NM_001371092.1Link to Protein Sequence:NP_001358021.1Re-query CCDS DB by Nucleotide ID:NM_001371092Re-query CCDS DB by Protein ID:NP_001358021Link to BLAST:NP_001358021.1
Original member Current member NCBI NM_001391992.1 NP_001378921.1 Accepted alive Link to Nucleotide Sequence:NM_001391992.1Link to Protein Sequence:NP_001378921.1Re-query CCDS DB by Nucleotide ID:NM_001391992Re-query CCDS DB by Protein ID:NP_001378921Link to BLAST:NP_001378921.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116.1 357 P54922 357 100% 0 0
NP_001278878.1 357 P54922 357 100% 0 0
NP_001358021.1 357 P54922 357 100% 0 0
NP_001378921.1 357 P54922 357 100% 0 0

Chromosomal Locations for CCDS 2990.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 119582170 119582467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119586285 119586645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119587464 119587878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGGAGAAGTATGTGGCTGCTATGGTGCTGAGTGCAGCTGGAGATGCCCTGGGGTACTACAATGGGAAGT
GGGAGTTCCTCCAGGATGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGATGCCCTAGA
CGTGGGAAGGTGGAGAGTTAGTGACGACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTGTGGAAGCT
GGGAAAGCCCCTAAGTTGACTCAACTGTATTACCTCCTTGCTAAGCATTACCAAGACTGCATGGAAGACA
TGGATGGGCGGGCACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGG
CTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCATCGGTCTC
AGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGATGACCCACC
ACCACCCAACAGGCTACCTGGGGGCCCTTGCGTCTGCTCTTTTTACAGCCTATGCTGTGAATAGCAGACC
ACCCTTGCAGTGGGGAAAAGGACTGATGGAGCTGCTACCAGAAGCTAAAAAGTACATTGTCCAATCAGGC
TACTTTGTAGAGGAAAATCTTCAACACTGGTCCTACTTCCAAACCAAATGGGAAAATTACCTAAAACTTA
GAGGGATTTTGGATGGAGAATCAGCCCCTACCTTCCCTGAGTCTTTCGGTGTGAAGGAGAGGGATCAGTT
CTACACCTCCCTGAGCTACTCTGGCTGGGGTGGCAGCAGTGGGCACGATGCCCCCATGATTGCCTACGAT
GCTGTTCTTGCTGCAGGAGACTCCTGGAAGGAGCTTGCCCACCGAGCCTTTTTCCATGGTGGAGACAGTG
ATTCTACAGCTGCCATTGCTGGCTGCTGGTGGGGAGTTATGTATGGTTTTAAAGGAGTGAGTCCCTCCAA
CTATGAGAAACTAGAATACAGAAACCGGCTGGAAGAGACAGCTAGGGCTTTATATTCTCTCGGGTCAAAA
GAAGACACTGTAATTTCCCTTTAG

Translation (357 aa):
MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIHRQLAQLGGLDALDVGRWRVSDDTVMHLATAEALVEA
GKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPNGWRIPFNSHEGGCGAAMRAMCIGL
RFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSG
YFVEENLQHWSYFQTKWENYLKLRGILDGESAPTFPESFGVKERDQFYTSLSYSGWGGSSGHDAPMIAYD
AVLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLEETARALYSLGSK
EDTVISL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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