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Report for CCDS29681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29681.1 Public Mus musculus 19 Psat1 23 108 98 CCDS HistoryNCBI Gene:107272Re-query CCDS DB by CCDS ID:29681.1Re-query CCDS DB by GeneID:107272See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025542.9 ENSMUSP00000025542.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025542.9Link to Ensembl Protein Viewer:ENSMUSP00000025542.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000025542Re-query CCDS DB by Protein ID:ENSMUSP00000025542
Original member Current member NCBI NM_177420.2 NP_803155.1 Accepted alive Link to Nucleotide Sequence:NM_177420.2Link to Protein Sequence:NP_803155.1Re-query CCDS DB by Nucleotide ID:NM_177420Re-query CCDS DB by Protein ID:NP_803155Link to BLAST:NP_803155.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_803155.1 370 Q99K85 370 100% 0 0

Chromosomal Locations for CCDS 29681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15906046 15906151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15906930 15907067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15909301 15909429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15914864 15915033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15917077 15917249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15918206 15918411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15919455 15919524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15920936 15920996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15924864 15924923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGGAAGCCACCAAGCAAGTGGTTAACTTTGGGCCCGGGCCTGCCAAGCTGCCACACTCGGTATTGTTGG
AGATCCAGAAGCAGCTACTAGACTACAGAGGACTCGGCATCAGTGTGCTCGAAATGAGTCACAGGTCATC
AGATTTTGCCAAGATTATTGGCAATACAGAGAATCTTGTGAGGGAATTGCTAGCTGTTCCCAACAACTAC
AAGGTGATCTTTGTACAAGGAGGTGGGTCTGGCCAGTTCAGTGCTGTCCCCTTAAATCTGATTGGCCTGA
AAGCTGGAAGGAGTGCTGACTACGTGGTGACCGGAGCTTGGTCAGCTAAGGCTGCGGAAGAAGCCAAGAA
GTTTGGAACGGTGAACATTGTCCACCCTAAACTTGGAAGTTACACAAAAATTCCAGACCCAAGCACCTGG
AACCTCAACCCGGACGCCTCCTATGTATACTTCTGTGCAAACGAGACTGTGCACGGGGTGGAGTTTGACT
TCGTACCTGACGTCAAGGGAGCGGTGCTGGTCTGTGACATGTCCTCAAACTTCTTATCCAGGCCGGTGGA
TGTTTCCAAGTTTGGTGTGATTTTCGCTGGTGCTCAGAAGAATGTTGGCTCTGCCGGGGTGACGGTGGTG
ATTGTCCGGGATGACCTGCTGGGGTTCTCGCTCAGAGAGTGCCCATCAGTCCTTGACTACAAAGTGCAGG
CTGGGAACAACTCTTTGTATAACACACCTCCGTGCTTCAGCATCTACGTCATGGGCATGGTCCTGGAATG
GATCAAGAACAACGGCGGGGCCGCAGCCATGGAGAAGCTCAGCTCCATCAAATCCCAAATGATTTATGAG
ATCATTGATAATTCTCAAGGATTTTATGTATGCCCAGTGGAGCGCCAGAATAGAAGCAGGATGAACATCC
CATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTTGGAAAAGCGGTTTCTTGACAAGGCGGTAGAACT
CAACATGATCTCCTTGAAGGGGCACAGGTCAGTGGGAGGCATTCGTGCCTCTCTGTATAACGCTGTCACA
ACCGAAGACGTTGAGAAGCTGGCGGCCTTCATGAAGAATTTCTTGGAGATGCATCAGCTGTGA

Translation (370 aa):
MEATKQVVNFGPGPAKLPHSVLLEIQKQLLDYRGLGISVLEMSHRSSDFAKIIGNTENLVRELLAVPNNY
KVIFVQGGGSGQFSAVPLNLIGLKAGRSADYVVTGAWSAKAAEEAKKFGTVNIVHPKLGSYTKIPDPSTW
NLNPDASYVYFCANETVHGVEFDFVPDVKGAVLVCDMSSNFLSRPVDVSKFGVIFAGAQKNVGSAGVTVV
IVRDDLLGFSLRECPSVLDYKVQAGNNSLYNTPPCFSIYVMGMVLEWIKNNGGAAAMEKLSSIKSQMIYE
IIDNSQGFYVCPVERQNRSRMNIPFRIGNAKGDEALEKRFLDKAVELNMISLKGHRSVGGIRASLYNAVT
TEDVEKLAAFMKNFLEMHQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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