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Report for CCDS26530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26530.1 Public Mus musculus 13 Arl10 23 108 98 CCDS HistoryNCBI Gene:56795Re-query CCDS DB by CCDS ID:26530.1Re-query CCDS DB by GeneID:56795See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26530.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026988.10 ENSMUSP00000026988.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026988.10Link to Ensembl Protein Viewer:ENSMUSP00000026988.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000026988Re-query CCDS DB by Protein ID:ENSMUSP00000026988
Original member NCBI NM_019968.2 NP_064352.2 Updated not alive Link to Nucleotide Sequence:NM_019968.2Link to Protein Sequence:NP_064352.2Re-query CCDS DB by Nucleotide ID:NM_019968Re-query CCDS DB by Protein ID:NP_064352
Current member NCBI NM_019968.3 NP_064352.2 Accepted alive Link to Nucleotide Sequence:NM_019968.3Link to Protein Sequence:NP_064352.2Re-query CCDS DB by Nucleotide ID:NM_019968Re-query CCDS DB by Protein ID:NP_064352Link to BLAST:NP_064352.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064352.2 243 Q9QXJ4 243 100% 0 0

Chromosomal Locations for CCDS 26530.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 54575095 54575277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 54575750 54575948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 54578793 54578968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 54580721 54580894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (732 nt):
ATGGCGCCGCGGCCGCTGGGCCCCTTGGTGCTGGCTCTGGGTGGCGCCGCAGCCGTGCTGGGCTCTGTGC
TCTTTATCCTCTGGAAAGCTTACTTCGGCCGCGGCCGGGAGCGGCGCTGGGACCGGGGCGAGGCCTGGTG
GGGCGCGGACACTGCCCGCCTCCCTCAGTGGGACGAGTGGGAGCCCGAGGACGAGGAAGATGAGCCGGCC
TTGGAAGAGCTGGAGCAGCGGGAAGTGTTGGTGCTGGGCTTGGATGGCTCAGGGAAAAGCACGTTCTTGC
GCATGCTGGCCGGGAAGCCACCGGTGGAAGGCCACGTCCCTACCTGGGGCTTCAACTCTGTTCGGCTGCC
TACCAAGAATTTCGAGGTGGACCTGTTAGAGATTGGTGGCAGCCAGAACCTGCGCTTTTACTGGAAGGAG
TTTGTCAACGAGGTGGACGTGCTGGTGTTCATGGTGGACTCGACTGACCGGCTAAGGCTGCCCTGGGCTC
GGCAGGAGCTGCAGAAACTGTTGGACAGGGATCCGGATCTGCCTGTTGTTATAGTGGCCAACAAGCAGGA
CCTGAGCGGGGCCATGAATATGGTGGAGCTGCAGCAGGAGCTGGGCCTCCTTGCTAGTTATAACCAGAGG
GAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAGGATCTGGCTTTGGGGAACCCGGCACTGTGCACA
TCTGGAAATTGCTCTTGCAGCTTCTCTCCTAA

Translation (243 aa):
MAPRPLGPLVLALGGAAAVLGSVLFILWKAYFGRGRERRWDRGEAWWGADTARLPQWDEWEPEDEEDEPA
LEELEQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYWKE
FVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDPDLPVVIVANKQDLSGAMNMVELQQELGLLASYNQR
EVFLLAASIAPAGSGFGEPGTVHIWKLLLQLLS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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