NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2582.1 Public Homo sapiens 3 CAMK1 24 110 108 CCDS HistoryNCBI Gene:8536Re-query CCDS DB by CCDS ID:2582.1Re-query CCDS DB by GeneID:8536See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256460.8 ENSP00000256460.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256460.8Link to Ensembl Protein Viewer:ENSP00000256460.3Re-query CCDS DB by Nucleotide ID:ENST00000256460Re-query CCDS DB by Protein ID:ENSP00000256460
Original member Current member NCBI NM_003656.5 NP_003647.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003656.5Link to Protein Sequence:NP_003647.1Re-query CCDS DB by Nucleotide ID:NM_003656Re-query CCDS DB by Protein ID:NP_003647Link to BLAST:NP_003647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003647.1 370 Q14012 370 100% 0 0

Chromosomal Locations for CCDS 2582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 9757539 9757621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9757729 9757846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9759488 9759575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9759672 9759750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9760656 9760768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9761461 9761536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9761631 9761757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9762914 9763052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9763139 9763213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9765759 9765890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9767667 9767749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGCTGGGGGCAGTGGAAGGCCCCAGGTGGAAGCAGGCGGAGGACATTAGAGACATCTACGACTTCCGAG
ATGTTCTGGGCACGGGGGCCTTCTCGGAGGTGATCCTGGCAGAAGATAAGAGGACGCAGAAGCTGGTGGC
CATCAAATGCATTGCCAAGGAGGCCCTGGAGGGCAAGGAAGGCAGCATGGAGAATGAGATTGCTGTCCTG
CACAAGATCAAGCACCCCAACATTGTAGCCCTGGATGACATCTATGAGAGTGGGGGCCACCTCTACCTCA
TCATGCAGCTGGTGTCGGGTGGGGAGCTCTTTGACCGTATTGTGGAAAAAGGCTTCTACACGGAGCGGGA
CGCCAGCCGCCTCATCTTCCAGGTGCTGGATGCTGTGAAATACCTGCATGACCTGGGCATTGTACACCGG
GATCTCAAGCCAGAGAATCTGCTGTACTACAGCCTGGATGAAGACTCCAAAATCATGATCTCCGACTTTG
GCCTCTCCAAGATGGAGGACCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTCCGGGATACGTGGCCCC
TGAAGTCCTGGCCCAGAAGCCCTACAGCAAGGCTGTGGATTGCTGGTCCATAGGTGTCATCGCCTACATC
TTGCTCTGCGGTTACCCTCCCTTCTATGACGAGAATGATGCCAAACTCTTTGAACAGATTTTGAAGGCCG
AGTACGAGTTTGACTCTCCTTACTGGGACGACATCTCTGACTCTGCCAAAGATTTCATCCGGCACTTGAT
GGAGAAGGACCCAGAGAAAAGATTCACCTGTGAGCAGGCCTTGCAGCACCCATGGATTGCAGGAGATACA
GCTCTAGATAAGAATATCCACCAGTCGGTGAGTGAGCAGATCAAGAAGAACTTTGCCAAGAGCAAGTGGA
AGCAAGCCTTCAATGCCACGGCTGTGGTGCGGCACATGAGGAAACTGCAGCTGGGCACCAGCCAGGAGGG
GCAGGGGCAGACGGCGAGCCATGGGGAGCTGCTGACACCAGTGGCTGGGGGGCCGGCAGCTGGCTGTTGC
TGTCGAGACTGCTGCGTGGAGCCGGGCACAGAACTGTCCCCCACACTGCCCCACCAGCTCTAG

Translation (370 aa):
MLGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL
HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR
DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI
LLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT
ALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQLGTSQEGQGQTASHGELLTPVAGGPAAGCC
CRDCCVEPGTELSPTLPHQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH