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Report for CCDS25476.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
25476.1 |
Public |
Mus musculus |
11 |
Tmem106a |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:217203](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:25476.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:217203](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 25476.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000039581.13 |
ENSMUSP00000045832.7 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000039581.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000045832.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000039581](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000045832](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000100403.8 |
ENSMUSP00000097971.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000100403.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000097971.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000100403](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000097971](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001359325.1 |
NP_001346254.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001359325.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001346254.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001359325](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001346254](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001346254.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001359326.1 |
NP_001346255.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001359326.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001346255.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001359326](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001346255](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001346255.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001359327.1 |
NP_001346256.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001359327.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001346256.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001359327](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001346256](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001346256.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_144830.3 |
NP_659079.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_144830.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_659079.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_144830](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_659079](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_659079.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 25476.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (786 nt): ATGGGTAAGGCAGTCTCCCAGCTCACCTCTCGGAAGGATGAGGACAAGCCTATCCTACCTGATAACCCAG CCATGGCCAGCCAGGCTGCCAACTACTTCAGCACTGGTAGCAGCAAGCCAGCACACTCCTGTATGCCTTA TGAAAAGGCTGCTAGTTCCAGCTTTGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGATCCCCCAAGAG CAAGAGAAGCAGCTGGTTGCTCTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGACGCACGAAGCTCT TTGTGTTCCTGTCGGTGGCCATCTGCCTGCTGATTTTCTCCCTCACCATCTTTTTCCTGTATCCCCGGCC CATTGCTGTGCGTCCTGTCGGCCTCAACTCTTCCACAGTAACCTTTGAAGACGCTCACGTACAGCTCAAC ACGACGAATGTCCTGAACATCTTCAACAGCAACTTCTATCCCATCACAGTGACACAGCTGACGGCCGAGG TGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATTGGCCAG TGAGCAGATGCCTTACGAAGTTGCCAGCAGGATTTTGGATGAAAACACATACAAAATCTGTACATGGCCG AAAATCAGAGTCCACCATATTCTTTTGAATATCCAGGGTTCTCTGACCTGCTCCTTCCTAAGCCATCCGC AACAGCTGCCCTTCGAGAGCTTTGAATATGTAGACTGCAGAGAAAACATGTCCCTGCCCCACCTGGAGCT GCCCCGCCCAGCCTGA
Translation (261 aa): MGKAVSQLTSRKDEDKPILPDNPAMASQAANYFSTGSSKPAHSCMPYEKAASSSFVTCPTCQGNGEIPQE QEKQLVALIPYGDQRLKPRRTKLFVFLSVAICLLIFSLTIFFLYPRPIAVRPVGLNSSTVTFEDAHVQLN TTNVLNIFNSNFYPITVTQLTAEVLHQASVVGQVTSSLRLHIGPLASEQMPYEVASRILDENTYKICTWP KIRVHHILLNIQGSLTCSFLSHPQQLPFESFEYVDCRENMSLPHLELPRPA
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