CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS24882.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
24882.1 |
Public |
Mus musculus |
11 |
Per1 |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 24882.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000021271.13 |
ENSMUSP00000021271.7 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000166748.7 |
ENSMUSP00000132635.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001159367.2 |
NP_001152839.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_011065.5 |
NP_035195.2 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 24882.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3876 nt): ATGAGTGGTCCCCTAGAAGGGGCCGATGGGGGAGGAGACCCCAGGCCCGGAGAACCTTTTTGTCCTGGAG GAGTCCCATCCCCTGGGGCCCCGCAGCACCGGCCTTGTCCAGGCCCCAGCCTGGCTGATGACACTGATGC AAACAGCAATGGCTCAAGTGGCAATGAGTCCAACGGACCCGAGTCCAGGGGCGCATCTCAGCGGAGTTCT CATAGTTCCTCTTCTGGCAATGGCAAGGACTCAGCTCTGCTGGAGACCACTGAGAGCAGCAAGAGTACAA ACTCACAGAGCCCATCCCCACCCAGCAGCTCCATTGCCTACAGCCTCCTGAGTGCGAGCTCAGAGCAGGA CAACCCATCTACCAGTGGCTGCAGCAGTGAACAGTCAGCTCGAGCCAGGACCCAGAAAGAACTCATGACT GCACTTCGGGAGCTCAAACTTCGACTGCCACCAGAGCGTCGGGGCAAGGGCCGCTCTGGGACCTTGGCCA CACTGCAGTACGCTCTGGCCTGTGTCAAGCAGGTTCAGGCTAACCAGGAATATTACCAGCAGTGGAGTCT GGAGGAGGGTGAGCCTTGTGCCATGGACATGTCTACTTACACCCTGGAGGAATTGGAGCATATCACATCC GAATACACACTTCGAAACCAGGACACCTTCTCTGTGGCTGTGTCCTTCCTGACAGGCCGGATTGTCTATA TTTCGGAGCAGGCAGGTGTCCTGCTGCGTTGCAAACGGGATGTGTTTCGGGGTGCCCGCTTCTCAGAGCT CCTGGCTCCCCAGGATGTGGGTGTCTTCTATGGCTCTACTACACCATCTCGACTGCCCACCTGGGGCACT GGCACCTCTGCAGGTTCAGGTCTCAAGGACTTCACCCAGGAAAAGTCTGTCTTCTGCCGAATCAGAGGAG GTCCTGACCGGGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAACCCCATATGTGACCAAGATTCGGGT CTCAGATGGAGCCCCTGCACAGCCGTGCTGCCTACTCATTGCCGAGCGCATCCACTCTGGTTATGAAGCT CCCCGGATCCCTCCTGACAAGAGGATCTTCACCACCCGACACACACCAAGCTGCCTCTTCCAGGATGTAG ATGAAAGGGCTGCCCCACTGCTGGGTTACCTTCCCCAGGATCTCCTGGGGGCTCCAGTACTTCTCTTTCT ACATCCTGAGGACCGACCCCTCATGCTGGCCATTCATAAGAAGATACTGCAGCTGGCAGGCCAGCCCTTT GACCATTCCCCTATTCGCTTCTGTGCTCGGAACGGGGAATATGTCACCATGGACACCAGCTGGGCCGGTT TTGTGCACCCCTGGAGCCGCAAGGTGGCTTTCGTGTTGGGTCGCCATAAAGTGCGCACGGCACCCCTGAA TGAGGACGTCTTCACTCCCCCAGCCCCCAGCCCAGCTCCGTCCCTGGACTCTGATATCCAGGAGCTCTCA GAGCAGATCCATCGATTGCTGCTGCAGCCTGTGCACAGCTCCAGCCCCACGGGGCTCTGTGGAGTTGGCC CTCTGATGTCCCCTGGTCCTCTACACAGCCCTGGCTCCTCCAGTGATAGCAATGGGGGGGACGCTGAGGG GCCTGGGCCTCCTGCTCCAGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTAAAGCACCAGGGA CAACAGCTCTTCATTGAATCTCGGGCCAAGCCCCCACCCCGGCCCCGCCTCCTTGCTACAGGTACATTCA AAGCCAAAGTCCTTCCCTGCCAGTCCCCAAACCCCGAACTGGAGGTGGCCCCAGTTCCTGACCAAGCCTC GTTAGCCTTGGCCCCTGAGGAGCCAGAGAGGAAAGAAACCTCTGGCTGTTCCTACCAGCAGATCAACTGC CTGGACAGCATCCTCAGGTATTTGGAGAGCTGCAACATTCCCAGTACAACCAAGCGTAAATGTGCCTCCT CCTCCTCCTACACTGCCTCTTCAGCCTCTGATGATGACAAGCAGAGGGCAGGTCCAGTTCCTGTGGGGGC CAAGAAAGATCCGTCGTCAGCAATGCTGTCTGGGGAGGGGGCAACTCCTCGGAAGGAGCCAGTGGTGGGA GGCACCCTGAGCCCGCTCGCCCTGGCCAATAAGGCAGAGAGCGTGGTGTCCGTCACCAGTCAGTGTAGCT TCAGCTCCACCATCGTCCATGTGGGAGACAAGAAGCCCCCGGAGTCGGACATCATCATGATGGAAGACCT GCCTGGCCTGGCCCCTGGCCCAGCCCCCAGTCCGGCCCCCAGCCCCACAGTAGCCCCTGACCCAACCCCA GATGCTTATCGCCCAGTGGGTCTGACCAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCT TCCTCAACCGCTTCAGAGATCTTGGCAGGCTTCGTGGACTTGACACCTCTTCTGTGGCCCCCTCAGCCCC TGGCTGCCACCATGGCCCCATTCCCCCTGGTCGCCGACACCACTGCCGATCTAAAGCAAAGCGTTCCCGC CACCACCACCACCAGACCCCCCGGCCCGAAACTCCCTGCTATGTCTCCCATCCTTCACCTGTGCCCTCTT CTGGACCCTGGCCACCCCCACCAGCCACGACCCCCTTCCCAGCAATGGTCCAGCCCTACCCACTCCCAGT ATTCTCCCCTCGAGGAGGACCCCAGCCCCTTCCCCCTGCCCCTACATCTGTGTCCCCTGCTACCTTCCCT TCTCCCTTAGTGACCCCAATGGTGGCCTTGGTGCTCCCTAACTATCTATTCCCTACCCCACCTAGTTATC CATATGGGGTGTCCCAGGCCCCTGTTGAGGGGCCACCCACGCCTGCTTCCCACTCGCCCTCTCCATCCCT GCCCCCACCACCTCTCAGCCCCCCCCACCGCCCAGACTCCCCACTGTTCAACTCGAGATGCAGCTCCCCA CTCCAGCTCAATCTGCTGCAGCTTGAGGAGTCCCCCCGCACGGAGGGGGGCGCTGCTGCAGGAGGCCCAG GAAGCAGTGCTGGGCCCCTGCCTCCCAGTGAGGAGACTGCTGAGCCAGAGGCCAGATTGGTGGAGGTTAC TGAGTCGTCCAATCAGGATGCACTTTCAGGCTCCAGCGACCTGCTGGAGCTACTGCTCCAAGAAGACTCT CGCTCGGGCACAGGCTCCGCAGCCTCAGGCTCCCTGGGCTCTGGCCTGGGCTCTGGGTCTGGTTCAGGAT CCCACGAAGGGGGAAGCACCTCAGCCAGCATCACCCGCAGCAGTCAGAGCAGCCATACAAGCAAGTACTT TGGCAGCATCGACTCTTCCGAGGCTGAAGCTGGGGCTGCTCGGGCCAGGACTGAGCCTGGGGACCAGGTC ATTAAGTGTGTGCTCCAGGACCCCATCTGGCTGCTCATGGCCAATGCCGACCAGCGTGTCATGATGACAT ACCAGGTGCCGTCCAGGGATGCAGCCTCTGTGCTGAAGCAAGACCGGGAGAGGCTCCGGGCCATGCAGAA ACAGCAGCCACGGTTCTCAGAGGACCAGAGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGC CAGCTGCCTCGGGCCCTTGATGTGACGGCGTGTGTGGACTGTGGCAGCAGCGTTCAAGATCCTGGCCACT CTGATGACCCCCTCTTCTCAGAACTGGATGGATTGGGGCTGGAGCCCATGGAAGAGGGTGGAGGCGAGGG TGGTGGGTGTGGTGTTGGCGGTGGTGGGGGTGATGGTGGTGAGGAGGCCCAGACCCAAATTGGGGCTAAG GGTTCAAGCTCTCAGGACTCTGCCATGGAGGAAGAAGAGCAAGGTGGGGGCTCATCCAGCCCAGCTTTAC CTGCAGAAGAAAACAGCACCAGCTAG
Translation (1291 aa): MSGPLEGADGGGDPRPGEPFCPGGVPSPGAPQHRPCPGPSLADDTDANSNGSSGNESNGPESRGASQRSS HSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPSTSGCSSEQSARARTQKELMT ALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQEYYQQWSLEEGEPCAMDMSTYTLEELEHITS EYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGT GTSAGSGLKDFTQEKSVFCRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEA PRIPPDKRIFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAPSLDSDIQELS EQIHRLLLQPVHSSSPTGLCGVGPLMSPGPLHSPGSSSDSNGGDAEGPGPPAPVTFQQICKDVHLVKHQG QQLFIESRAKPPPRPRLLATGTFKAKVLPCQSPNPELEVAPVPDQASLALAPEEPERKETSGCSYQQINC LDSILRYLESCNIPSTTKRKCASSSSYTASSASDDDKQRAGPVPVGAKKDPSSAMLSGEGATPRKEPVVG GTLSPLALANKAESVVSVTSQCSFSSTIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPAPSPTVAPDPTP DAYRPVGLTKAVLSLHTQKEEQAFLNRFRDLGRLRGLDTSSVAPSAPGCHHGPIPPGRRHHCRSKAKRSR HHHHQTPRPETPCYVSHPSPVPSSGPWPPPPATTPFPAMVQPYPLPVFSPRGGPQPLPPAPTSVSPATFP SPLVTPMVALVLPNYLFPTPPSYPYGVSQAPVEGPPTPASHSPSPSLPPPPLSPPHRPDSPLFNSRCSSP LQLNLLQLEESPRTEGGAAAGGPGSSAGPLPPSEETAEPEARLVEVTESSNQDALSGSSDLLELLLQEDS RSGTGSAASGSLGSGLGSGSGSGSHEGGSTSASITRSSQSSHTSKYFGSIDSSEAEAGAARARTEPGDQV IKCVLQDPIWLLMANADQRVMMTYQVPSRDAASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKG QLPRALDVTACVDCGSSVQDPGHSDDPLFSELDGLGLEPMEEGGGEGGGCGVGGGGGDGGEEAQTQIGAK GSSSQDSAMEEEEQGGGSSSPALPAEENSTS
|