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Report for CCDS24063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24063.1 Public Mus musculus 10 Tle2 23 108 98 CCDS HistoryNCBI Gene:21886Re-query CCDS DB by CCDS ID:24063.1Re-query CCDS DB by GeneID:21886See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000146358.7 ENSMUSP00000121125.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000146358.7Link to Ensembl Protein Viewer:ENSMUSP00000121125.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000146358Re-query CCDS DB by Protein ID:ENSMUSP00000121125
Original member NCBI NM_019725.2 NP_062699.1 Updated not alive Link to Nucleotide Sequence:NM_019725.2Link to Protein Sequence:NP_062699.1Re-query CCDS DB by Nucleotide ID:NM_019725Re-query CCDS DB by Protein ID:NP_062699
Current member NCBI NM_019725.3 NP_062699.1 Accepted alive Link to Nucleotide Sequence:NM_019725.3Link to Protein Sequence:NP_062699.1Re-query CCDS DB by Nucleotide ID:NM_019725Re-query CCDS DB by Protein ID:NP_062699Link to BLAST:NP_062699.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062699.1 767 Q9WVB2 767 100% 0 0

Chromosomal Locations for CCDS 24063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81575668 81575691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81575805 81575902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81576236 81576299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81576529 81576642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81577629 81577691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81580257 81580331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81580484 81580667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81580895 81580914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81581645 81581755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81582413 81582457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81582737 81582886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81584603 81584741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81586213 81586373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81586855 81586928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81587092 81587341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81587553 81587800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81587874 81588021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81588809 81588959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81589420 81589496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81590225 81590332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGTACCCTCAGGGAAGGCACCCGACCCCGCTGCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGGAAA
TCTGTGACCGGATCAAAGAGGAATTCCAGTTTCTTCAAGCTCAGTACCACAGCCTCAAGCTAGAATGTGA
GAAGCTGGCCAGCGAGAAGACAGAAATGCAAAGGCATTATGTGATGGCTGCACCCCATCAGTGTCCCCAG
GGTGGCACCAGCTATCCACACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTACGGACTCA
ACATTGAGATGCATAAACAGGCTGAGATTGTGAAACGCCTCAGTGCGATCTGTGCCCAGATGGTCCCGTT
CCTCACTCAGGAGCATCAGCAGCAGGTGCTCCAGGCTGTGGACCGAGCCAAGCAGGTGACCGTGGGGGAA
CTGAACAGCCTCCTGGGGCAGCAGAATCAGCTCCAGCCGCTGTCCCACGCACCCCCCGTGCCTCTCACCC
CGCGCCCAGCCGGCCTGGTGGGTGCCGGGGCCACTGGGCTGCTGGCCCTATCTGGGGCACTGGCTGCGCA
GGCCCAGCTGGTGGCTGCCGTAAAGGAAGACCGTGTGGGTGTGGACGCCGAGGGGTCCAGAGTGGACAGA
GCTGCCAGCAGGAGTTCTTCCCCGTCTCCCCCTGAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAG
GCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAAGGATCTGTCAGGGCCTTATGACAGTGAGGAAGACAA
GAGTGACTATAACCTGGTAGTGGATGAGGACCAACCGTCAGAGCCCCCCAGCCCTGTGACCACCCCTTGT
GGGAAGGCGCCCCTCTGCATTCCTGCCCGCAGGGACCTCACAGACAGTCCAGCCTCCTTGGCCTCCAGTT
TGGGCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAACGATCTTCCCACAGGCACTCCTGCCTCCAG
GTCATGTGGTACCTCTCCACCCCAGGACTCGTCCACCCCGGGGCCCAGCTCAGCCAGTCACCTCTGCCAG
CTGGCGGCTCAGCCGGCAGCACCCACAGACAGCATCGCCCTGAGGAGTCCCCTGACCTTGTCCAGCCCTT
TCACCTCATCCTTCAGCCTGGGCTCCCACAGCACCCTCAATGGGGACCTCTCCATGCCTGGCTCCTATGT
CGGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGTCGTGTATGGACGCTCACCTCTGCAGATGGCATTT
GAATCGCACCCCCATCTCCGAGGCTCGTCTGTCTCCTTGCCTGGCATCCCTGTGGCTAAGCCGGCTTACT
CCTTCCACGTGTCTGCGGATGGCCAGATGCAGCCTGTGCCCTTCCCGTCTGATGCTCTGGTAGGCACAGG
CATCCCTCGCCACGCAAGGCAGCTACACACGCTGGCCCACGGTGAGGTGGTGTGTGCCGTCACCATCAGC
AGCTCCACACAGCACGTGTACACAGGCGGCAAAGGATGCGTGAAGGTGTGGGACGTGGGCCAGCCGGGTA
GCAAGACCCCTGTGGCACAGCTGGATTGCCTGAACCGAGACAACTACATCCGCTCCTGCAAGCTGCTGCC
CGACGGGCAGAGCCTGATTGTAGGTGGCGAGGCCAGTACCCTGTCCATTTGGGACCTGGCAGCACCCACA
CCACGGATCAAAGCAGAGCTGACTTCGTCTGCCCCGGCCTGCTATGCTCTGGCCGTCAGTCCGGACGCCA
AGGTCTGCTTCTCCTGCTGCAGCGACGGTAACATCGTGGTCTGGGACCTGCAGAACCAGGCCATGGTCAG
ACAGTTCCAGGGCCACACGGACGGGGCCAGCTGCATCGACATATCAGACTACGGGACCCGGCTGTGGACT
GGGGGCCTGGACAACACTGTGCGCTGCTGGGACCTGCGCGAGGGCCGCCAGCTTCAGCAGCATGACTTCA
GTTCCCAGATTTTCTCATTGGGCCACTGTCCCAATCAGGACTGGTTGGCTGTGGGGATGGAGAGCAGCCA
CGTGGAGGTCCTGCATGTGCGCAAGCCTGAGAAGTACCAGCTCCGCCTCCATGAGAGCTGCGTGCTGTCA
CTCAAGTTCGCTTCCTGTGGACGCTGGTTTGTGAGCACAGGCAAGGACAACCTGCTCAATGCCTGGAGGA
CACCCTATGGGGCCAGCATTTTTCAGTCCAAAGAATCATCTTCTGTACTGAGCTGCGACATCTCCAGGAA
TAATAAGTACATCGTGACAGGCTCAGGGGACAAGAAGGCCACTGTGTATGAGGTGGTGTACTGA

Translation (767 aa):
MYPQGRHPTPLQSGQPFKFSVLEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMAAPHQCPQ
GGTSYPHWPRLSPLQYYEMSYGLNIEMHKQAEIVKRLSAICAQMVPFLTQEHQQQVLQAVDRAKQVTVGE
LNSLLGQQNQLQPLSHAPPVPLTPRPAGLVGAGATGLLALSGALAAQAQLVAAVKEDRVGVDAEGSRVDR
AASRSSSPSPPESLVEEDHPSSRGGSGKQQRAEDKDLSGPYDSEEDKSDYNLVVDEDQPSEPPSPVTTPC
GKAPLCIPARRDLTDSPASLASSLGSPLPRSKDIALNDLPTGTPASRSCGTSPPQDSSTPGPSSASHLCQ
LAAQPAAPTDSIALRSPLTLSSPFTSSFSLGSHSTLNGDLSMPGSYVGLHLSPQVSSSVVYGRSPLQMAF
ESHPHLRGSSVSLPGIPVAKPAYSFHVSADGQMQPVPFPSDALVGTGIPRHARQLHTLAHGEVVCAVTIS
SSTQHVYTGGKGCVKVWDVGQPGSKTPVAQLDCLNRDNYIRSCKLLPDGQSLIVGGEASTLSIWDLAAPT
PRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQAMVRQFQGHTDGASCIDISDYGTRLWT
GGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSHVEVLHVRKPEKYQLRLHESCVLS
LKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISRNNKYIVTGSGDKKATVYEVVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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