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Report for CCDS24014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24014.1 Public Mus musculus 10 Pwwp3a 23 108 98 CCDS HistoryNCBI Gene:68114Re-query CCDS DB by CCDS ID:24014.1Re-query CCDS DB by GeneID:68114See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24014.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020365.14 ENSMUSP00000020365.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020365.14Link to Ensembl Protein Viewer:ENSMUSP00000020365.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000020365Re-query CCDS DB by Protein ID:ENSMUSP00000020365
Original member NCBI NM_023431.5 NP_075920.4 Updated not alive Link to Nucleotide Sequence:NM_023431.5Link to Protein Sequence:NP_075920.4Re-query CCDS DB by Nucleotide ID:NM_023431Re-query CCDS DB by Protein ID:NP_075920
Current member NCBI NM_023431.6 NP_075920.4 Accepted alive Link to Nucleotide Sequence:NM_023431.6Link to Protein Sequence:NP_075920.4Re-query CCDS DB by Nucleotide ID:NM_023431Re-query CCDS DB by Protein ID:NP_075920Link to BLAST:NP_075920.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075920.4 682 Q6DID5 682 100% 0 0

Chromosomal Locations for CCDS 24014.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80228382 80228438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80228995 80229080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80230057 80230127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80232238 80233047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80234223 80234327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80236111 80236181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80238315 80238391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80238860 80238920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80239920 80239995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80240392 80240442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80240764 80241200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80241797 80241885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80243586 80243643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2049 nt):
ATGACGGATGCCAAGTATGTCCTCTGCCGATGGGGGAAGCGACTGTGGCCTGCGAAGGTTTTGGCCAGAA
CCGAGACTTCAGCAAAAAACAAGAAAAAGAAGGAATTCTTCCTAGATGTTCAGATACTCTCGCTGAAGGA
AAAGATCCAGGTTAAGAGCTCAGCCGTGGAGGCCCTGCAGAAGTCGCACATTGAGAACATTGCTGCCTTC
CTGGCCTCTCAGAATGAAGTCCCAGCTACTCCCCTGGAGGAGCTGACTTACCGACGCTCCCTGCGAGTGG
CCCTGGATGTCTTGAATGAGAGGACCAGTTTGAGTCCTGAAAGTCATCCAATAGAAGATGGGATTACACT
GTCTCAGAAGGAGAAAACAGATGCAGATGTGGCCTCGCAGGTCTCCAGTGCTCCTTCTCCATCTCTCCTC
GGTGAAGATGGTCAAGCCGTGGTAGCCCAGTGCGCATCCAAGAGGAGGTCGGAGTACAGTTCAAAAAGCC
TGTTGCCGTCGTCTGCATTAGAAGATCATCTCAGGTGCCAAGTGGGCCCCAAGACAGGCCTCTCAGAGAG
TGGAGCTGGAGACAAGTCTCAGGATGATTCTGGGTTACAGCTGGACCATGGGCAGGAGAGCACAACCAAA
AAGAGGCAGAGGAATTTGGGAGAGAAACCTACCCGGCGCCGAAGATCAGAGTCTGGCCTTTCCAAGGGAG
AAAGTGTCTTAAAGAGCCAGGGACAGGCATCCAGCTGTGTGGCCCTGGCTTCACCTAGGCCGCCCTCCCA
AACCAGGGACGAGGAGCCCTGTGCCGGGGTCAAAGGCTGTGACTGGGTCAAGTCATCAGGCAACATCAGG
CCACTCTCGGCCTCTGAGAGAAGCAGAGGATGCCCCACAAAGAGACCACGCTTGGATGGAGGCCAGAACC
CACCTACCAGGCAGCTGGGGACTAGAACTGTGGGGGCAGCGCCCTGCCCTAGGAGCTGTTCTGGGGAGGT
CACGATGCTGTGCAGTGCTGGAGCGGGTGACAAACCAGAGGAAGATCCTGTGTCCTCAGAAGAATCCACA
GGGTTCAAGTCCACACACTCCCTGCTGGAGGAGGAGGAGGAGGAAGAGGAGGAACCACCTCGGATCCTTC
TGTATCACGAACCACGGTCATTTGAAGTAGGAATGCTGGTCTGGCTTAAATACCAAAAATACCCATTCTG
GCCAGCTGTGGTCAAGAGTGTCCGGCGAAGAGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACATG
AACCCCAAGGGCCGAGGAATCACTGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCACG
CACTGCTGGACAGAGCCAAGGAGGACTTTGCCCAGGCCATTGGCTGGTGTGTTTCACTCATCACTGACTA
CCGTGTGCGGCTGGGATGCGGCTCCTTTGCTGGGTCTTTCTTGGAATACTACGCTGCTGATATCAGCTAC
CCTGTGCGCAAGTCTATCCAACAGGACGTCCTGGGGACCAGGTTTCCTCAGCTGGGCAAGGGGGACCCTG
AGGAGCCTGTAGGGGACAGCCAGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTGCCTGACCGCTCCAG
GGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTGCAGAGAGCCAC
CTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCG
TGACTTGCATGGAGACATACCTGGAGGATGAGGCGCAGCTGGATGAGGTGGTGGAGTACCTGCAGGGCGT
CTGCAGAGACATGGACGGCCAGGTGCCTGAGCGCGGCAGTGGAGACCGCATTCGCTTCATCTTGGATGTG
CTGCTGCCCGAGGCAATCATCTGTGCCATTTCCGCGGTGGAGGCGGTGGATTACAAGACAGCCGAGCAGA
AGTACATTCGTGGCCCCACACTTAGCTACCGGGAAAAGGAAATCTTTGACAATGAACTCCTGGAGGAGAG
GAACCGACGCCGTCGCTGA

Translation (682 aa):
MTDAKYVLCRWGKRLWPAKVLARTETSAKNKKKKEFFLDVQILSLKEKIQVKSSAVEALQKSHIENIAAF
LASQNEVPATPLEELTYRRSLRVALDVLNERTSLSPESHPIEDGITLSQKEKTDADVASQVSSAPSPSLL
GEDGQAVVAQCASKRRSEYSSKSLLPSSALEDHLRCQVGPKTGLSESGAGDKSQDDSGLQLDHGQESTTK
KRQRNLGEKPTRRRRSESGLSKGESVLKSQGQASSCVALASPRPPSQTRDEEPCAGVKGCDWVKSSGNIR
PLSASERSRGCPTKRPRLDGGQNPPTRQLGTRTVGAAPCPRSCSGEVTMLCSAGAGDKPEEDPVSSEEST
GFKSTHSLLEEEEEEEEEPPRILLYHEPRSFEVGMLVWLKYQKYPFWPAVVKSVRRRDKKASVLFIEGNM
NPKGRGITVSLRRLKHFDCKEKHALLDRAKEDFAQAIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISY
PVRKSIQQDVLGTRFPQLGKGDPEEPVGDSQLGQWRPCRKVLPDRSRAARDRANQKLVEYIVKAKGAESH
LRAILHSRKPSRWLKTFLSSSQCVTCMETYLEDEAQLDEVVEYLQGVCRDMDGQVPERGSGDRIRFILDV
LLPEAIICAISAVEAVDYKTAEQKYIRGPTLSYREKEIFDNELLEERNRRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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