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Report for CCDS22003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22003.1 Public Mus musculus 7 Hras 23 108 98 CCDS HistoryNCBI Gene:15461Re-query CCDS DB by CCDS ID:22003.1Re-query CCDS DB by GeneID:15461See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22003.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026572.10 ENSMUSP00000026572.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026572.10Link to Ensembl Protein Viewer:ENSMUSP00000026572.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000026572Re-query CCDS DB by Protein ID:ENSMUSP00000026572
Original member Current member EBI ENSMUST00000097957.10 ENSMUSP00000095570.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097957.10Link to Ensembl Protein Viewer:ENSMUSP00000095570.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000097957Re-query CCDS DB by Protein ID:ENSMUSP00000095570
Original member NCBI NM_001130443.1 NP_001123915.1 Updated not alive Link to Nucleotide Sequence:NM_001130443.1Link to Protein Sequence:NP_001123915.1Re-query CCDS DB by Nucleotide ID:NM_001130443Re-query CCDS DB by Protein ID:NP_001123915
Current member NCBI NM_001130443.2 NP_001123915.1 Accepted alive Link to Nucleotide Sequence:NM_001130443.2Link to Protein Sequence:NP_001123915.1Re-query CCDS DB by Nucleotide ID:NM_001130443Re-query CCDS DB by Protein ID:NP_001123915Link to BLAST:NP_001123915.1
Original member NCBI NM_008284.2 NP_032310.2 Updated not alive Link to Nucleotide Sequence:NM_008284.2Link to Protein Sequence:NP_032310.2Re-query CCDS DB by Nucleotide ID:NM_008284Re-query CCDS DB by Protein ID:NP_032310
Current member NCBI NM_008284.3 NP_032310.2 Accepted alive Link to Nucleotide Sequence:NM_008284.3Link to Protein Sequence:NP_032310.2Re-query CCDS DB by Nucleotide ID:NM_008284Re-query CCDS DB by Protein ID:NP_032310Link to BLAST:NP_032310.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123915.1 189 Q61411-1 189 100% 0 0
NP_032310.2 189 Q61411-1 189 100% 0 0

Chromosomal Locations for CCDS 22003.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 141191348 141191467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141192131 141192290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141192442 141192620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141192830 141192940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGACAGAATACAAGCTTGTGGTGGTGGGCGCTGGAGGCGTGGGAAAGAGTGCCCTGACCATCCAGCTGA
TCCAGAACCACTTTGTGGACGAGTATGATCCCACTATAGAGGACTCCTACCGGAAACAGGTGGTCATTGA
TGGGGAGACATGTCTACTGGACATCTTAGACACAGCAGGTCAAGAAGAGTATAGTGCCATGCGGGACCAG
TACATGCGCACAGGGGAGGGCTTCCTCTGTGTATTTGCCATCAACAACACCAAGTCCTTCGAGGACATCC
ATCAGTACAGGGAGCAGATCAAGCGGGTGAAAGATTCAGATGATGTGCCAATGGTGCTGGTGGGCAACAA
GTGTGACCTGGCTGCTCGCACTGTTGAGTCTCGGCAGGCCCAGGACCTTGCTCGCAGCTATGGCATCCCC
TACATTGAAACATCAGCCAAGACCCGGCAGGGCGTGGAGGATGCCTTCTATACACTAGTCCGTGAGATTC
GGCAGCATAAATTGCGGAAACTGAACCCACCCGATGAGAGTGGTCCTGGCTGCATGAGCTGCAAATGTGT
GCTGTCCTGA

Translation (189 aa):
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQ
YMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIP
YIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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