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Report for CCDS21599.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21599.1 Public Mus musculus 7 Or51k2 23 108 98 CCDS HistoryNCBI Gene:258351Re-query CCDS DB by CCDS ID:21599.1Re-query CCDS DB by GeneID:258351See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21599.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098188.1 ENSMUSP00000095790.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098188.1Link to Ensembl Protein Viewer:ENSMUSP00000095790.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098188Re-query CCDS DB by Protein ID:ENSMUSP00000095790
Original member Current member EBI ENSMUST00000216006.1 ENSMUSP00000149105.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216006.1Link to Ensembl Protein Viewer:ENSMUSP00000149105.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216006Re-query CCDS DB by Protein ID:ENSMUSP00000149105
Original member Current member NCBI NM_146354.1 NP_666466.1 Accepted alive Link to Nucleotide Sequence:NM_146354.1Link to Protein Sequence:NP_666466.1Re-query CCDS DB by Nucleotide ID:NM_146354Re-query CCDS DB by Protein ID:NP_666466Link to BLAST:NP_666466.1

Chromosomal Locations for CCDS 21599.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103946568 103947506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGTTCAACAGCAGTCAATTCACCCCAAAATACTTCCTGCTGACCGGTTTCCCTGGTCTGGAAGCATGGT
ACCCTTGGCTGATCTTCCCATTCTGTTTCACATATACTATAGGCATCATGGGCAATACCCTCATTCTGGC
TGTGATCAGAAAAAACAGTTCTCTGCACCAGCCGATGTTCTTGTTCCTGGCCATGCTGGCCTTCTCCGAG
CTTGGTGTCTCTGCTTCGACCCTGCCCACTGTGCTCAGCATCTTTCTGCTCGGTGCCAATAAAATCTGCT
TTGAAGCCTGCCTTTTGCAGATGTTCTCCATACATTCATTTTCCATCATGGAGTCAGGAGTTCTTCTAGC
CATGTCTGTGGATCGCTTTGTCGCCATCTACAACCCACTCCGATACACCGCCATCCTGACTCTGCCCCGC
ATTGCTGGTACCAGTCTTACACTTGGATTGAAGAGTCTGTTGCTCATGTTCCCCTTGCCTTTTCTCCTAA
AGCGTCTGCCTTTCTGTGGTCACAATGTGCTTTCCCATTCCTACTGTCTGCACTCAGATCTAATCCAACT
TCCCTGTGGGGACACTCGTCCCAACAGCATTCTGGGGCTCTGCATCGTAACTTCCACTTTTGGGCTGGAC
TCTCTGCTCATTGTTGTCTCTTATGTGTTGATCCTGTACACGGTACTAAACATTACCTCTGGGGAGGGGC
GGAGGAAAGCTCTCAATACCTGTGTGTCACATATGTGTGCAGTTCTTGTGTACTATGTGCCTATGATCAG
CGTGGCTCTGGTGCATCGATTCATGAAGCATGCTGTACCTGCTGTTCGCCTTCTCCTGGCCAACATCTAT
CTTCTGGTACCACCGATGCTCAATCCCATCATCTACAGTGCTAAGAACAGGCAGATTCGCCAGGGGTTAA
TACAACTCTTTCTTCAAAGAAAATATTAA

Translation (312 aa):
MFNSSQFTPKYFLLTGFPGLEAWYPWLIFPFCFTYTIGIMGNTLILAVIRKNSSLHQPMFLFLAMLAFSE
LGVSASTLPTVLSIFLLGANKICFEACLLQMFSIHSFSIMESGVLLAMSVDRFVAIYNPLRYTAILTLPR
IAGTSLTLGLKSLLLMFPLPFLLKRLPFCGHNVLSHSYCLHSDLIQLPCGDTRPNSILGLCIVTSTFGLD
SLLIVVSYVLILYTVLNITSGEGRRKALNTCVSHMCAVLVYYVPMISVALVHRFMKHAVPAVRLLLANIY
LLVPPMLNPIIYSAKNRQIRQGLIQLFLQRKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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