NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS20826.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20826.1 Public Mus musculus 7 Mzf1 23 108 98 CCDS HistoryNCBI Gene:109889Re-query CCDS DB by CCDS ID:20826.1Re-query CCDS DB by GeneID:109889See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20826.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000182515.7 ENSMUSP00000138387.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182515.7Link to Ensembl Protein Viewer:ENSMUSP00000138387.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182515Re-query CCDS DB by Protein ID:ENSMUSP00000138387
Original member NCBI NM_145819.2 NP_665818.2 Updated not alive Link to Nucleotide Sequence:NM_145819.2Link to Protein Sequence:NP_665818.2Re-query CCDS DB by Nucleotide ID:NM_145819Re-query CCDS DB by Protein ID:NP_665818
Current member NCBI NM_145819.3 NP_665818.2 Accepted alive Link to Nucleotide Sequence:NM_145819.3Link to Protein Sequence:NP_665818.2Re-query CCDS DB by Nucleotide ID:NM_145819Re-query CCDS DB by Protein ID:NP_665818Link to BLAST:NP_665818.2

Chromosomal Locations for CCDS 20826.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 13043268 13044700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13051491 13051611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13051733 13051803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13052183 13052366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13052743 13053141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2208 nt):
ATGAGACCCACTGTGCTGGGCTCCTCGGGCTGTGCACCCCCAGAAAATGAGCCTGCTCTGGTGAAGCTGG
AGGACTCTGACAGCGACGATGAGAGAGAAGATATATTGTGGGACCCAGGCCTTGAGGCTGCACGTCTACG
CTTCCGGTGCTTCCGGTATGAGGATGCAATAGGTCCTCAGGAAGCCCTGGCCCAGCTCCGAGAACTGTGT
CACCAGTGGCTACGCCCAGAAGTACATTCCAAGGAACAGGTGCTAGAGCTCTTGGTGCTGGAGCAGTTCC
TGGGTGCACTGCCCCCTGAGATCCAGGCCCAAGTGCAAGGGCAGTGGCCAGGCAGCCCTGAAGAGGCTGC
TGCCTTGGTTGACAGACTTCGATGGGAGCTTGATGGACCTCGGAAATGGGTCACAGTCCAGGTGCAGGGC
AAGGAGGTCCTATCAGAGAAGATGGAACCCTCCAGCTTCCAGCCAAGACCTCACATCAAGCTTCAGACTC
CAGACCCTGGGGCTGAGACTCCCCAAGGAGCCATGCAGGAATTGCCACTGAACCTACCAATGAAAGAGGA
GACAGAGTTGTTGGGGAATCCAGAGCTCCTGGAATCTGGGCCTCTTCCTGCTGCTCAAGAGGCTGCAGCC
ACTCTCCTACCTAAGGAGACCCAGGGCCATGGGACAACACTGGACCAGACCTCTCCTCATAGCGACACTG
AGCCTGATGTGCCCCCATGGAGTGAGGACCCTATGCCCCTGTGGCATGAGGAAGTAGGGGGCATCTTTTC
ACCAGGGTTTACGCTGCAGATGGACAGCATCACGGCAGAGCCAGATATGATGAGCCCCCACCTCCATGTC
CCCTGGGATCTGGACATGGCTAGCCTCTCTGGACAGATACAGTCCCCTACCACGGAAGGTGGCTTTGCCC
ATGCCCTTGTACTCCCCAGCGACCCAGGAGGTGAACAGGACCCTGCCTGCGAGGATCCCTGCCCCAGTGT
GGGCCCAGCATTGGTGGCGACTCGATGGCATGCCCCAAGGGGCCGGAGCCAGAGCCACCCTCGCTCGGGG
ACTGGAGCCATGCGAGGCGGCCGCTGCGACGTGTGTGGCAAGGTGTTCAGCCAGCGAAGCAATCTGCTGC
GGCACCAGAAGATCCACACAGGCGAGAGACCGTTCGTGTGTGGCGAGTGTGGCCGCAGCTTCAGCCGCAG
CTCTCACCTACTGCGCCACCAGCTCACGCATACTGAGGAACGGCCTTTCGTGTGCCGCGACTGTGGCCAG
GGCTTCGTGCGCAGCGCCCGCCTGGAGGAGCACCGGCGTGTACACACGGGCGAGCAGCCGTTCCGCTGCA
CAGAGTGTGGCCAGAGCTTTCGGCAGCGCTCCAACCTACTGCAGCACCAGCGCATCCACGGCGATCCGCC
TGGTCCAGCGCCATCCATCCTGCCCCTCGCCGGAGTCCCGGAGCCCCCGGGCCCCTTCCCATGCAGCGAG
TGCTGCGAGAGCTTCCCACGACGCGCCGTGCTGCTAGAGCACCAGGCGGTGCACACCGGGGACAAGTCCT
TCGGATGCGTGGAGTGCGGCGAGCGCTTCGGCCGCCGTTCGGTGCTGTTGCAGCACCGGCGCGTGCACAG
CGGCGAACGGCCCTTCGCCTGTGCCGAGTGCGGCCAAAGCTTCCGGCAGCGCTCTAATCTCACCCAGCAC
CAGCGCATCCACACTGGAGAGCGGCCCTTCGCCTGCGCCGAATGTGGCAAGACCTTCCGCCAGCGGCCCA
CGCTCACGCAGCACCTGCGTGTGCATACGGGTGAGAAGCCCTTCGCGTGCCCCGAGTGCGGCCAGCGCTT
CAGCCAGCGACTCAAGCTCACGCGCCACCAAAGGACCCATACTGGCGAGAAGCCCTACTGCTGCGGTGAG
TGCGGCCTCGGCTTCACGCAGGTGTCTCGGCTCACCGAGCACCAGCGCATCCACACAGGTGAGCGGCCCT
TCGCCTGTCCCGAATGTGGCCAGAGTTTCCGGCAGCACGCCAACCTCACCCAGCACCGGCGCATCCATAC
GGGCGAGCGACCCTACGCGTGTCCCGAATGTGGCAAGGCCTTTCGCCAGCGGCCCACGCTCACGCAGCAC
CTGCGCACTCACCGGCACGAAAAGCCCTTCGCCTGCCAGGACTGTGGCCGACGCTTCAACCAGAGCACCA
AGCTCATCCAGCACCAGCGTGTCCACAGCACTGAGTAG

Translation (735 aa):
MRPTVLGSSGCAPPENEPALVKLEDSDSDDEREDILWDPGLEAARLRFRCFRYEDAIGPQEALAQLRELC
HQWLRPEVHSKEQVLELLVLEQFLGALPPEIQAQVQGQWPGSPEEAAALVDRLRWELDGPRKWVTVQVQG
KEVLSEKMEPSSFQPRPHIKLQTPDPGAETPQGAMQELPLNLPMKEETELLGNPELLESGPLPAAQEAAA
TLLPKETQGHGTTLDQTSPHSDTEPDVPPWSEDPMPLWHEEVGGIFSPGFTLQMDSITAEPDMMSPHLHV
PWDLDMASLSGQIQSPTTEGGFAHALVLPSDPGGEQDPACEDPCPSVGPALVATRWHAPRGRSQSHPRSG
TGAMRGGRCDVCGKVFSQRSNLLRHQKIHTGERPFVCGECGRSFSRSSHLLRHQLTHTEERPFVCRDCGQ
GFVRSARLEEHRRVHTGEQPFRCTECGQSFRQRSNLLQHQRIHGDPPGPAPSILPLAGVPEPPGPFPCSE
CCESFPRRAVLLEHQAVHTGDKSFGCVECGERFGRRSVLLQHRRVHSGERPFACAECGQSFRQRSNLTQH
QRIHTGERPFACAECGKTFRQRPTLTQHLRVHTGEKPFACPECGQRFSQRLKLTRHQRTHTGEKPYCCGE
CGLGFTQVSRLTEHQRIHTGERPFACPECGQSFRQHANLTQHRRIHTGERPYACPECGKAFRQRPTLTQH
LRTHRHEKPFACQDCGRRFNQSTKLIQHQRVHSTE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH