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Report for CCDS19933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19933.1 Public Mus musculus 6 Ankrd7 23 108 98 CCDS HistoryNCBI Gene:75196Re-query CCDS DB by CCDS ID:19933.1Re-query CCDS DB by GeneID:75196See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19933.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031489.9 ENSMUSP00000031489.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031489.9Link to Ensembl Protein Viewer:ENSMUSP00000031489.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000031489Re-query CCDS DB by Protein ID:ENSMUSP00000031489
Original member Current member NCBI NM_029202.2 NP_083478.2 Accepted alive Link to Nucleotide Sequence:NM_029202.2Link to Protein Sequence:NP_083478.2Re-query CCDS DB by Nucleotide ID:NM_029202Re-query CCDS DB by Protein ID:NP_083478Link to BLAST:NP_083478.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083478.2 279 Q9D504 279 100% 0 0

Chromosomal Locations for CCDS 19933.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 18866483 18866727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 18867982 18868096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 18868244 18868417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 18869233 18869339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 18869894 18870031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 18879341 18879401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGAAGAAGTTCTTCCCCTTCAGGGGAAAGAGGAAGACAGATGATTCCCACAGCCACTCCTCAGAAGTGC
CCATTAGCCTGGCCAAAACCGCACCGCCCAGCCTGTCCATAGGTGGAGGATATCACCTTCGAGATAAGCA
CTTAAAGAAACTTCATAAAGCTGCTACCATTGGCAATGAGCAGAAGCTGAAGGATTACCTTGAACGCAAG
AAATACAATGTGAATGGGCGGGACAAAAGAAGCAGAACACCTTTGCATTTGGCCTGTGCTAATGGATATA
CAAATATTGTCTCTCTCTTAATTGAGAATCAATGCAAAATTAATGTCCAGGATAGTGAAAACAGAACCCC
ATTGATTAAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCATGGTGCAGATCCA
AATCTGGTAGATGTTTATAGTAATACGGCTCTCCATTATGCTGTTTGTGGCCAAAATATTTCATTAGCCA
ATAAATTGCTTCAATATAAAGCCAATCTTGAAGCCAAAAATAAGGACGGTCACACTCCGCTTTTACTTGC
TGTTGCTGAAAATAATGAAAATATGGTAAAATTCCTTCTGAAGAAAGGAGCAGATGTAAATGCATCAGAT
AAAAACCACAGAACAGCCATCATGATTGCTCTGATTGTTGAACCAACAAGTTCTGTAAAACTTCTTCTTC
AGCAAGATACGGACCTAGCCCACAAAGATATTTATGGATTTACAGCTGAGGAATATGCTTCATTTAATGG
CTTTACTATGTATCACCATATAACTGCCAATAATGAGAACAAGAAGAAAACAGAGCAAACAGCTTACTGA

Translation (279 aa):
MKKFFPFRGKRKTDDSHSHSSEVPISLAKTAPPSLSIGGGYHLRDKHLKKLHKAATIGNEQKLKDYLERK
KYNVNGRDKRSRTPLHLACANGYTNIVSLLIENQCKINVQDSENRTPLIKAVECQQESCATVLLLHGADP
NLVDVYSNTALHYAVCGQNISLANKLLQYKANLEAKNKDGHTPLLLAVAENNENMVKFLLKKGADVNASD
KNHRTAIMIALIVEPTSSVKLLLQQDTDLAHKDIYGFTAEEYASFNGFTMYHHITANNENKKKTEQTAY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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