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Report for CCDS17527.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
17527.1 |
Public |
Mus musculus |
3 |
Slc27a3 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 17527.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000029541.11 |
ENSMUSP00000029541.5 |
Accepted |
alive |
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NCBI |
NM_011988.3 |
NP_036118.2 |
Updated |
not alive |
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NCBI |
NM_011988.4 |
NP_036118.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_036118.2 |
667 |
O88561-1 |
667 |
99.8501% |
0 |
1 |
Chromosomal Locations for CCDS 17527.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2004 nt): ATGGCGGCCCTCCTGCTGCTGCTGCCCTTACTCTTGCTCCTGCCTCTGCTGCTGAAGCTAGACGTCTGGC CTCAGCTGCGCTGGCTGCCGGCCGACCTGGCCTTCACAGTTCGCGCCCTCCGCTGCAAAAGGGCCCTTCG AGCACGCGCGCTGGCCGCAGCGGCCGCCGACCCCGAAAGCTCTGAGAGCGGGTGCAGTCTGGCCTGGCGT CTCGCGTACCTGGCCCGGGAGCAGCCGACACACACCTTCCTCATCCACGGCGCGCAGCGCTTTAGCTACG CGGAGGCTGAGCGCGAGAGCAACCGGATTGCTCGCGCCTTTCTGCGCGCACGGGGCTGGACCGGGGGCCG CCGAGGCTCGGGCAGGGGCAGCACTGAGGAAGGCGCACGCGTGGCGCCTCCGGCTGGAGATGCGGCTGCT AGAGGGACGACCGCGCCCCCTCTGGCACCCGGGGCGACCGTGGCGCTGCTCCTCCCAGCGGGCCCGGATT TCCTTTGGATTTGGTTCGGACTGGCCAAAGCTGGCCTGCGCACGGCCTTTGTGCCCACCGCTTTACGCCG AGGACCCCTGCTGCACTGCCTCCGCAGCTGCGGTGCGAGTGCGCTCGTGCTGGCCACAGAGTTCCTGGAG TCCCTGGAGCCGGACCTGCCGGCCTTGAGAGCCATGGGGCTCCACCTATGGGCGACGGGCCCTGAAACTA ATGTAGCTGGAATCAGCAATTTGCTATCGGAAGCAGCAGACCAAGTGGATGAGCCAGTGCCGGGGTACCT CTCTGCCCCCCAGAACATAATGGACACCTGCCTGTACATCTTCACCTCTGGCACTACTGGCCTGCCCAAG GCTGCTCGAATCAGTCATCTGAAGGTTCTACAGTGCCAGGGATTCTACCATCTGTGTGGAGTCCACCAGG AGGACGTGATCTACCTCGCACTCCCACTGTACCACATGTCTGGCTCCCTTCTGGGCATTGTGGGCTGCTT GGGCATTGGGGCCACCGTGGTGCTGAAACCCAAGTTCTCAGCTAGCCAGTTCTGGGACGATTGCCAGAAA CACAGGGTGACAGTGTTCCAGTACATTGGGGAGTTGTGCCGATACCTCGTCAACCAGCCCCCGAGCAAGG CAGAGTGTGACCATAAGGTGCGCTTGGCAGTGGGCAGTGGGTTGCGCCCAGACACCTGGGAGCGTTTCCT GCGGCGATTTGGACCTCTGCAGATACTGGAGACGTATGGCATGACAGAGGGCAACGTAGCTACGTTCAAT TACACAGGACGGCAGGGTGCAGTGGGGCGAGCTTCCTGGCTTTACAAGCACATCTTCCCCTTCTCCTTGA TTCGATACGATGTCATGACAGGGGAGCCTATTCGGAATGCCCAGGGGCACTGCATGACCACATCTCCAGG TGAGCCAGGCCTACTGGTGGCCCCAGTGAGCCAGCAGTCCCCCTTCCTGGGCTATGCTGGGGCTCCGGAG CTGGCCAAGGACAAGCTGCTGAAGGATGTCTTCTGGTCTGGGGACGTTTTCTTCAATACTGGGGACCTCT TGGTCTGTGATGAGCAAGGCTTTCTTCACTTCCACGATCGTACTGGAGACACCTTCAGGTGGAAGGGAGA GAATGTGGCCACAACTGAAGTGGCTGAGGTCTTGGAGACCCTGGACTTCCTTCAGGAGGTGAACATCTAT GGAGTCACGGTGCCAGGGCACGAAGGCAGGGCAGGCATGGCGGCCTTGGCTCTGCGGCCCCCGCAGGCTC TGAACCTGGTGCAGCTCTACAGCCATGTTTCTGAGAACTTGCCACCGTATGCCCGACCTCGGTTTCTCAG GCTCCAGGAATCTTTGGCCACTACTGAGACCTTCAAACAGCAGAAGGTTAGGATGGCCAATGAGGGCTTT GACCCCAGTGTACTGTCTGACCCACTCTATGTTCTGGACCAAGATATAGGGGCCTACCTGCCCCTCACAC CTGCCCGGTACAGTGCCCTCCTGTCTGGAGACCTTCGAATCTGA
Translation (667 aa): MAALLLLLPLLLLLPLLLKLDVWPQLRWLPADLAFTVRALRCKRALRARALAAAAADPESSESGCSLAWR LAYLAREQPTHTFLIHGAQRFSYAEAERESNRIARAFLRARGWTGGRRGSGRGSTEEGARVAPPAGDAAA RGTTAPPLAPGATVALLLPAGPDFLWIWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGASALVLATEFLE SLEPDLPALRAMGLHLWATGPETNVAGISNLLSEAADQVDEPVPGYLSAPQNIMDTCLYIFTSGTTGLPK AARISHLKVLQCQGFYHLCGVHQEDVIYLALPLYHMSGSLLGIVGCLGIGATVVLKPKFSASQFWDDCQK HRVTVFQYIGELCRYLVNQPPSKAECDHKVRLAVGSGLRPDTWERFLRRFGPLQILETYGMTEGNVATFN YTGRQGAVGRASWLYKHIFPFSLIRYDVMTGEPIRNAQGHCMTTSPGEPGLLVAPVSQQSPFLGYAGAPE LAKDKLLKDVFWSGDVFFNTGDLLVCDEQGFLHFHDRTGDTFRWKGENVATTEVAEVLETLDFLQEVNIY GVTVPGHEGRAGMAALALRPPQALNLVQLYSHVSENLPPYARPRFLRLQESLATTETFKQQKVRMANEGF DPSVLSDPLYVLDQDIGAYLPLTPARYSALLSGDLRI
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