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Report for CCDS14983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14983.1 Public Mus musculus 1 Tmem237 23 108 98 CCDS HistoryNCBI Gene:381259Re-query CCDS DB by CCDS ID:14983.1Re-query CCDS DB by GeneID:381259See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14983.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094917.9 ENSMUSP00000092522.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094917.9Link to Ensembl Protein Viewer:ENSMUSP00000092522.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094917Re-query CCDS DB by Protein ID:ENSMUSP00000092522
Original member Current member NCBI NM_001033449.2 NP_001028621.1 Accepted alive Link to Nucleotide Sequence:NM_001033449.2Link to Protein Sequence:NP_001028621.1Re-query CCDS DB by Nucleotide ID:NM_001033449Re-query CCDS DB by Protein ID:NP_001028621Link to BLAST:NP_001028621.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028621.1 413 Q3V0J1-2 413 100% 0 0

Chromosomal Locations for CCDS 14983.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 59101137 59101198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59105546 59105667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59106544 59106634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59107454 59107527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59108038 59108229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59108675 59108798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59109039 59109196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59109988 59110105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59114081 59114218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59115873 59115929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59117331 59117341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59117975 59118006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59119952 59120014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGACCTCCCGGGAAACTGTGGGTGAACCCCCTCCGCTCCTGGGGACGCCGGCCGACGCTGAGCGTCCTC
CACGAGCACTCCCACCTGTGCCAAGTGCTATCCAAGACGATATTCCACTTAGTCATCCTAAGAAAAAGAA
GTCCAGAACAAAAAGCTCGCTAGCTACCGCTTCTTCGGAAGGCCATGCTGAGCCCGTTGTTAACAGGAGG
GCTGAAGGCAGTGAGCCACCAGCTGCAGAACTCAAGGAGCACCCAGAAGCTCCTGCTCCAAGGAGACAGA
AGAAGATAAGACCACCTCCTGAGTTGGAGACTTCCCTCACCGAAAGGCCATCGAGTCCATCTCTACTACG
GAACGAAAACGGCATTGATGCGGAGCCTCGTGAGGAGGCAGTGATTCCAAAACCGAGAAGGAAGGCAAAG
AAAACCCAGCCAGCTGAGCCACAGTATGCTAGCGAGCTAGGGGTGGAAGATGAAGACATACTCACAGATG
AGCAGAGCACTCTAGAACATCACTCTAGGTTCACGGCACCCACCGGAGTTAGCCAGCCTGTTGGCAAAGT
ATTTGTGGAAAAAAGCCGGAGGTTTCAGGCGGCGGACCGTTCCGAGTTGATAAAGACCACAGAAAACATA
GATGTGTCAATGGACGTGAAGCCATCTTGGACTACCCGAGATGTGGCACTTTCTGTGCACCGAGCTTTCA
GGATGGTCGGTCTGTTCTCTCATGGCTTCTTGGCTGGCTGTGCTGTGTGGAATACTGTTGTGATCTACGT
TCTTGCAGGAGATCAGCTGTCTAATGTCTCCAACCTTCTGCAGCAGTACAAGCCCTTGGCTTATCCCTTC
CAGAGCCTTCTTTACTTGCTTTTGGCTCTAAGTACAGTTTCAGCATTTGATAGGACTGACTTTGCTAAAA
TATCAGTAGCAATCCGGAACTTTTTGGCCCTGGAACCAACAGCTTTAGCTTCTTTTCTGTATTTTACTGC
TCTAATACTATCTCTGAGTCAGCAAATGACAAGTGACAGAATCCACCTTTACGAACCTTCTGTCAATGGA
AGCCTCTGGGCAGCAGAAGCTGAGGAACCGATTCTCGTGCCATGGATCATAGTGAATCTGGTGGTGGCTC
TCCTGGTTGGATTATCCTGGCTCTTTCTGTCTTACAGACCAGGCATGGATCTTAGTGAAGAGTTAATGTT
CTTTTCTGATGTGGACGAGCACCCTGAGACAGGAACCAAAGCCTCTCCATAG

Translation (413 aa):
MTSRETVGEPPPLLGTPADAERPPRALPPVPSAIQDDIPLSHPKKKKSRTKSSLATASSEGHAEPVVNRR
AEGSEPPAAELKEHPEAPAPRRQKKIRPPPELETSLTERPSSPSLLRNENGIDAEPREEAVIPKPRRKAK
KTQPAEPQYASELGVEDEDILTDEQSTLEHHSRFTAPTGVSQPVGKVFVEKSRRFQAADRSELIKTTENI
DVSMDVKPSWTTRDVALSVHRAFRMVGLFSHGFLAGCAVWNTVVIYVLAGDQLSNVSNLLQQYKPLAYPF
QSLLYLLLALSTVSAFDRTDFAKISVAIRNFLALEPTALASFLYFTALILSLSQQMTSDRIHLYEPSVNG
SLWAAEAEEPILVPWIIVNLVVALLVGLSWLFLSYRPGMDLSEELMFFSDVDEHPETGTKASP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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