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Report for CCDS14960.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14960.1 Public Mus musculus 1 Mob4 23 108 98 CCDS HistoryNCBI Gene:19070Re-query CCDS DB by CCDS ID:14960.1Re-query CCDS DB by GeneID:19070See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14960.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162364.7 ENSMUSP00000125415.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162364.7Link to Ensembl Protein Viewer:ENSMUSP00000125415.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162364Re-query CCDS DB by Protein ID:ENSMUSP00000125415
Original member Current member NCBI NM_025283.3 NP_079559.2 Accepted alive Link to Nucleotide Sequence:NM_025283.3Link to Protein Sequence:NP_079559.2Re-query CCDS DB by Nucleotide ID:NM_025283Re-query CCDS DB by Protein ID:NP_079559Link to BLAST:NP_079559.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079559.2 225 Q6PEB6 225 100% 0 0

Chromosomal Locations for CCDS 14960.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 55131300 55131359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55136677 55136739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55145124 55145224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55148319 55148361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55148548 55148634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55150146 55150225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55150971 55151082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55152675 55152806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (678 nt):
ATGGTCATGGCGGAGGGGACGGCAGTGCTGAGGCGGAACAGGCCAGGCACCAAGGCGCAGGATTTCTATA
ATTGGCCTGATGAATCATTTGATGAAATGGACAGTACACTTGCTGTTCAGCAGTATATTCAACAGAACAT
AAGGGCAGACTGCTCCAATATTGACAAAATTCTTGAACCACCTGAAGGCCAAGATGAAGGTGTATGGAAG
TATGAACATTTAAGGCAATTCTGCCTTGAACTAAATGGACTTGCTGTCAAACTTCAGAGTGAATGCCATC
CAGATACCTGTACTCAGATGACAGCAACTGAACAATGGATTTTTCTTTGTGCAGCTCATAAAACTCCAAA
AGAGTGTCCTGCCATAGATTATACAAGACACACACTGGATGGTGCTGCATGTCTTCTGAATAGCAATAAA
TATTTTCCCAGCAGGGTTAGCATAAAAGAATCATCTGTAGCAAAACTAGGATCAGTGTGCCGTAGGATTT
ATAGAATATTTTCACATGCCTATTTTCATCACCGGCAGATATTTGATGAATATGAAAATGAAACATTTTT
ATGTCATCGGTTTACCAAATTTGTGATGAAATATAATCTGATGTCGAAGGATAACCTGATTGTACCAATT
TTAGAAGAGGAAGTTCAGAACTCAGTTTCTGGGGAAAGTGAAGCATGA

Translation (225 aa):
MVMAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEPPEGQDEGVWK
YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECPAIDYTRHTLDGAACLLNSNK
YFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPI
LEEEVQNSVSGESEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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