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Report for CCDS14751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14751.1 Public Homo sapiens X FAM50A 24 110 108 CCDS HistoryNCBI Gene:9130Re-query CCDS DB by CCDS ID:14751.1Re-query CCDS DB by GeneID:9130See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393600.8 ENSP00000377225.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393600.8Link to Ensembl Protein Viewer:ENSP00000377225.3Re-query CCDS DB by Nucleotide ID:ENST00000393600Re-query CCDS DB by Protein ID:ENSP00000377225
Original member Current member NCBI NM_004699.4 NP_004690.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004699.4Link to Protein Sequence:NP_004690.1Re-query CCDS DB by Nucleotide ID:NM_004699Re-query CCDS DB by Protein ID:NP_004690Link to BLAST:NP_004690.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004690.1 339 Q14320 339 100% 0 0

Chromosomal Locations for CCDS 14751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 154444236 154444346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154445633 154445717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154445812 154445911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154446415 154446560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154448484 154448560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154448690 154448756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154448893 154448954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154449221 154449297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154449681 154449735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154449883 154449931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154450029 154450099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154450209 154450319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154450424 154450432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGGCTCAATACAAGGGCGCCGCGAGCGAGGCCGGCCGCGCCATGCACCTGATGAAGAAGCGGGAGAAGC
AGCGCGAGCAGATGGAGCAGATGAAGCAGCGCATCGCGGAGGAGAACATCATGAAATCCAACATTGACAA
GAAGTTCTCTGCGCACTACGACGCGGTGGAGGCAGAGCTCAAGTCCAGCACCGTGGGTCTCGTGACCCTG
AATGACATGAAGGCCAAGCAGGAGGCTCTGGTGAAGGAGCGGGAGAAGCAGCTGGCCAAGAAGGAGCAGT
CCAAGGAGCTGCAGATGAAGCTGGAGAAGCTTCGAGAGAAGGAGCGTAAGAAGGAAGCCAAGCGGAAGAT
CTCCAGCCTGTCCTTCACCCTGGAGGAGGAAGAAGAGGGAGGCGAGGAGGAAGAGGAGGCGGCCATGTAT
GAGGAGGAGATGGAAAGGGAAGAGATCACCACGAAGAAGAGAAAACTGGGGAAGAACCCAGACGTTGACA
CAAGCTTCTTGCCTGATCGAGACCGTGAGGAGGAGGAGAATCGGCTTCGGGAAGAGCTGCGGCAGGAGTG
GGAAGCCAAGCAGGAGAAGATCAAGAGTGAGGAGATCGAGATCACCTTCAGCTACTGGGATGGCTCTGGG
CACCGGCGGACAGTCAAGATGAGAAAGGGCAACACCATGCAGCAGTTCCTGCAGAAGGCGCTCGAGATCC
TTCGGAAAGACTTCAGTGAGCTGAGGTCCGCAGGGGTGGAGCAGCTCATGTACATCAAGGAGGACTTGAT
CATCCCTCACCATCACAGCTTCTACGACTTCATCGTCACCAAGGCACGGGGGAAGAGTGGACCACTCTTC
AACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGACGCCACTGTGGAGAAGGATGAGTCCCATGCAG
GCAAGGTGGTGCTGAGGAGCTGGTACGAGAAGAACAAGCACATCTTTCCCGCCAGCCGCTGGGAACCCTA
CGACCCTGAAAAGAAGTGGGACAAGTACACGATCCGCTGA

Translation (339 aa):
MAQYKGAASEAGRAMHLMKKREKQREQMEQMKQRIAEENIMKSNIDKKFSAHYDAVEAELKSSTVGLVTL
NDMKAKQEALVKEREKQLAKKEQSKELQMKLEKLREKERKKEAKRKISSLSFTLEEEEEGGEEEEEAAMY
EEEMEREEITTKKRKLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIEITFSYWDGSG
HRRTVKMRKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLF
NFDVHDDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTIR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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