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Report for CCDS14380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14380.1 Public Homo sapiens X ZC4H2 24 110 108 CCDS HistoryNCBI Gene:55906Re-query CCDS DB by CCDS ID:14380.1Re-query CCDS DB by GeneID:55906See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14380.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374839.8 ENSP00000363972.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374839.8Link to Ensembl Protein Viewer:ENSP00000363972.3Re-query CCDS DB by Nucleotide ID:ENST00000374839Re-query CCDS DB by Protein ID:ENSP00000363972
Original member Current member NCBI NM_018684.4 NP_061154.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018684.4Link to Protein Sequence:NP_061154.1Re-query CCDS DB by Nucleotide ID:NM_018684Re-query CCDS DB by Protein ID:NP_061154Link to BLAST:NP_061154.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061154.1 224 Q9NQZ6-1 224 100% 0 0

Chromosomal Locations for CCDS 14380.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 64917783 64917896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64919042 64919204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64920081 64920253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64921817 64921988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64976325 64976377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (675 nt):
ATGGCAGATGAGCAAGAAATCATGTGCAAATTGGAAAGCATTAAAGAGATCAGGAACAAGACCCTGCAGA
TGGAGAAGATCAAGGCTCGTTTGAAGGCTGAGTTTGAGGCACTTGAGTCAGAGGAAAGGCACCTGAAGGA
ATACAAGCAGGAGATGGACCTTCTGCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCGACTGATCCAC
GCTGACATCAATGTGATGGAAAACACTATCAAACAATCTGAGAATGACCTAAACAAGCTGCTAGAGTCTA
CAAGGAGGCTGCATGATGAGTATAAGCCACTGAAAGAACATGTGGATGCCCTGCGCATGACTCTGGGCCT
GCAGAGGCTCCCTGACTTGTGTGAAGAAGAGGAGAAGCTTTCCTTGGATTACTTTGAGAAGCAGAAAGCA
GAATGGCAGACAGAACCTCAGGAGCCCCCCATCCCTGAGTCCCTGGCCGCTGCAGCCGCTGCCGCCCAAC
AGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAA
GGCCTGCTTGTCATGTCACCAGCAAATTCACCGGAATGCACCTATATGCCCTCTTTGCAAGGCCAAGAGT
CGGTCCCGGAACCCCAAAAAGCCGAAACGGAAGCAGGATGAATAA

Translation (224 aa):
MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIH
ADINVMENTIKQSENDLNKLLESTRRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKA
EWQTEPQEPPIPESLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKS
RSRNPKKPKRKQDE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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