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Report for CCDS14311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14311.1 Public Homo sapiens X SLC35A2 24 110 108 CCDS HistoryNCBI Gene:7355Re-query CCDS DB by CCDS ID:14311.1Re-query CCDS DB by GeneID:7355See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14311.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247138.11 ENSP00000247138.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247138.11Link to Ensembl Protein Viewer:ENSP00000247138.5Re-query CCDS DB by Nucleotide ID:ENST00000247138Re-query CCDS DB by Protein ID:ENSP00000247138
Original member Current member NCBI NM_005660.3 NP_005651.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005660.3Link to Protein Sequence:NP_005651.1Re-query CCDS DB by Nucleotide ID:NM_005660Re-query CCDS DB by Protein ID:NP_005651Link to BLAST:NP_005651.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005651.1 396 P78381-1 396 100% 0 0

Chromosomal Locations for CCDS 14311.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48903438 48903465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48904746 48905482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48906392 48906543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48909814 48909996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48911546 48911636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGGCAGCGGTTGGGGCTGGTGGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGG
AGCCGGGGACCGCCAGTGCGGCTCACAGGCGCCTGAAGTACATATCCCTAGCTGTGCTGGTGGTCCAGAA
TGCCTCCCTCATCCTCAGCATCCGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTTGCCACCACTGCT
GTGGTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAACG
TGAAGCACCTGGTTCTCTTCCTCCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGT
GCCCTCTCTCATCTACACCTTGCAGAATAACCTCCAGTATGTTGCCATCTCTAACCTACCAGCTGCCACT
TTCCAGGTGACATACCAGCTGAAGATCCTGACCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCC
TTTCCCGGCTGCAGTGGGCCTCCCTGCTGCTCCTCTTCACTGGCGTCGCCATTGTCCAGGCACAGCAAGC
CGGTGGGGGAGGCCCACGGCCACTGGATCAGAACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCCTGT
CTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGC
GCAACCTGCAACTGGGCCTCTTCGGCACAGCACTGGGCCTGGTGGGGCTCTGGTGGGCTGAGGGTACCGC
CGTGGCCACCCGTGGTTTCTTTTTTGGGTACACACCTGCTGTCTGGGGCGTGGTGCTCAACCAGGCCTTC
GGCGGGCTACTGGTGGCTGTGGTTGTCAAGTACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGT
CCATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACGTGGACCCATTATTTGCCCTTGG
CGCTGGACTCGTCATTGGTGCTGTCTACCTCTACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCT
GCCTCTGCCTCCGCCTCCGGGCCCTGCGTTCACCAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGT
CTTCCCACCGTGGAGACCTCATCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGTTCCTA
G

Translation (396 aa):
MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTA
VVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAAT
FQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQNPGAGLAAVVASC
LSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAF
GGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGAAKAIAS
ASASASGPCVHQQPPGQPPPPQLSSHRGDLITEPFLPKLLTKVKGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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