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Report for CCDS14210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14210.1 Public Homo sapiens X EIF2S3 24 110 108 CCDS HistoryNCBI Gene:1968Re-query CCDS DB by CCDS ID:14210.1Re-query CCDS DB by GeneID:1968See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253039.9 ENSP00000253039.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253039.9Link to Ensembl Protein Viewer:ENSP00000253039.4Re-query CCDS DB by Nucleotide ID:ENST00000253039Re-query CCDS DB by Protein ID:ENSP00000253039
Original member Current member NCBI NM_001415.4 NP_001406.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001415.4Link to Protein Sequence:NP_001406.1Re-query CCDS DB by Nucleotide ID:NM_001415Re-query CCDS DB by Protein ID:NP_001406Link to BLAST:NP_001406.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001406.1 472 P41091 472 100% 0 0

Chromosomal Locations for CCDS 14210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 24054969 24055037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24055615 24055678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24057421 24057548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24057633 24057754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24060088 24060182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24062416 24062574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24064201 24064335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24065998 24066092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24067964 24068108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24071558 24071727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24073091 24073263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 24076722 24076785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGGCGGGCGGAGAAGCTGGAGTGACTCTAGGGCAGCCGCATCTTTCGCGTCAGGATCTCACCACCTTGG
ATGTTACCAAGTTGACGCCACTTTCACACGAAGTTATCAGCAGACAAGCCACAATTAACATAGGTACAAT
TGGTCATGTAGCTCATGGGAAATCCACAGTCGTCAAAGCTATTTCTGGAGTTCATACTGTCAGGTTCAAA
AATGAACTAGAAAGAAATATTACAATCAAGCTTGGATATGCTAATGCTAAGATTTATAAGCTTGATGACC
CAAGTTGCCCTCGGCCAGAATGTTATAGATCTTGTGGGAGCAGTACACCTGACGAGTTTCCTACGGACAT
TCCAGGGACCAAAGGGAACTTCAAATTAGTCAGACATGTTTCCTTTGTTGACTGTCCTGGCCACGATATT
TTGATGGCTACTATGCTGAACGGTGCAGCAGTGATGGATGCAGCTCTTCTGTTGATAGCTGGTAATGAAT
CTTGCCCTCAGCCTCAGACATCGGAACACCTGGCTGCTATAGAGATCATGAAACTGAAGCATATTTTGAT
TCTACAAAATAAAATTGATTTGGTAAAAGAAAGTCAGGCTAAAGAACAATACGAGCAGATCCTTGCATTT
GTCCAAGGTACAGTAGCAGAGGGAGCTCCCATTATTCCAATTTCAGCTCAGCTGAAATACAATATTGAAG
TTGTTTGTGAGTACATAGTAAAGAAAATTCCAGTACCCCCAAGAGACTTTACTTCAGAGCCCCGGCTTAT
TGTTATTAGATCTTTTGATGTCAACAAACCTGGCTGTGAAGTTGATGACCTTAAGGGAGGTGTAGCTGGT
GGTAGTATCCTAAAAGGAGTATTAAAGGTGGGCCAGGAGATAGAAGTAAGACCTGGTATTGTTTCCAAAG
ATAGTGAAGGAAAACTCATGTGTAAACCAATCTTTTCCAAAATTGTATCACTTTTTGCGGAGCATAATGA
TCTGCAATATGCTGCTCCAGGCGGTCTTATTGGAGTTGGAACAAAAATTGACCCCACTTTGTGCCGGGCT
GACAGAATGGTGGGGCAAGTACTTGGTGCAGTCGGAGCTTTACCTGAGATATTCACAGAATTGGAAATTT
CCTATTTCCTGCTTAGACGGCTTCTAGGTGTACGCACTGAAGGAGACAAGAAAGCAGCAAAGGTTCAAAA
GCTGTCTAAGAATGAAGTGCTCATGGTGAACATAGGATCCCTGTCAACAGGAGGGAGAGTTAGTGCTGTC
AAGGCCGATTTGGGTAAAATTGTTTTGACCAATCCAGTGTGCACAGAGGTAGGAGAAAAAATTGCCCTTA
GCCGAAGAGTTGAAAAACACTGGCGTTTAATTGGTTGGGGTCAGATAAGAAGAGGAGTGACAATCAAGCC
AACAGTAGATGATGACTGA

Translation (472 aa):
MAGGEAGVTLGQPHLSRQDLTTLDVTKLTPLSHEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFK
NELERNITIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDI
LMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAF
VQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAG
GSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRA
DRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAV
KADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTVDDD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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