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Report for CCDS13632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13632.1 Public Homo sapiens 21 DONSON 24 110 108 CCDS HistoryNCBI Gene:29980Re-query CCDS DB by CCDS ID:13632.1Re-query CCDS DB by GeneID:29980See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13632.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303071.10 ENSP00000307143.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303071.10Link to Ensembl Protein Viewer:ENSP00000307143.4Re-query CCDS DB by Nucleotide ID:ENST00000303071Re-query CCDS DB by Protein ID:ENSP00000307143
Original member Current member NCBI NM_017613.4 NP_060083.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017613.4Link to Protein Sequence:NP_060083.1Re-query CCDS DB by Nucleotide ID:NM_017613Re-query CCDS DB by Protein ID:NP_060083Link to BLAST:NP_060083.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060083.1 566 Q9NYP3-1 566 100% 0 0

Chromosomal Locations for CCDS 13632.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 33578307 33578444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33579350 33579562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33581302 33581500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33581951 33582055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33582165 33582246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33583488 33583666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33584590 33584768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33585978 33586181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33587522 33587602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 33588321 33588641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1701 nt):
ATGGCCCTTTCGGTGCCCGGCTACTCACCGGGCTTCCGAAAGCCGCCCGAGGTAGTGCGGCTCCGACGGA
AAAGGGCCCGGAGCCGTGGAGCTGCCGCCTCCCCGCCCCGTGAGCTGACGGAGCCGGCGGCCCGCCGAGC
CGCCCTGGTGGCGGGGCTGCCTCTTCGCCCTTTCCCTGCTGCGGGGGGCAGAGGCGGTGGCAGCGGCGGC
GGCCCGGCCGCTGCTCGGAGGAACCCCTTCGCCCGCCTGGACAACCGACCGCGGGTCGCCGCGGAGCCCC
CCGACGGGCCGGCCCGCGAGCAGCCGGAGGCCCCGGTCCCGTTTTTAGATTCTAATCAAGAAAATGATTT
GCTATGGGAAGAGAAGTTTCCTGAAAGAACAACTGTTACTGAATTACCTCAGACTTCACATGTATCATTC
TCCGAGCCTGATATTCCGTCCTCAAAAAGTACTGAGTTACCTGTGGACTGGAGTATTAAAACGCGACTCC
TTTTCACCTCTTCTCAACCCTTTACCTGGGCAGATCATTTGAAAGCACAGGAAGAAGCTCAAGGTCTTGT
CCAGCATTGTAGGGCAACAGAAGTTACTTTGCCTAAAAGTATACAGGATCCCAAACTCTCCTCTGAGCTC
CGTTGTACCTTCCAGCAGAGCCTTATCTATTGGCTCCACCCTGCTTTGTCTTGGCTACCACTGTTCCCTC
GTATTGGAGCTGATAGAAAAATGGCTGGAAAGACAAGTCCTTGGTCAAATGATGCAACCCTGCAGCATGT
TTTAATGAGTGACTGGTCTGTGAGCTTTACTTCTCTATATAATTTGCTGAAGACAAAACTTTGCCCCTAT
TTCTACGTTTGTACCTATCAGTTTACTGTCCTGTTCCGAGCAGCAGGATTAGCTGGAAGTGACTTAATCA
CAGCTCTCATATCTCCAACAACTCGAGGTTTAAGAGAAGCTATGAGAAATGAAGGTATTGAATTTTCTCT
GCCTTTAATAAAAGAAAGTGGCCATAAGAAGGAGACAGCATCTGGAACAAGCTTGGGATATGGGGAGGAG
CAAGCCATCAGTGATGAGGATGAAGAGGAAAGTTTTTCCTGGCTGGAAGAGATGGGTGTGCAAGATAAAA
TTAAAAAGCCAGACATACTTTCTATCAAGCTGCGTAAAGAGAAACATGAAGTACAAATGGATCACAGACC
TGAATCTGTTGTGTTGGTAAAAGGAATCAACACCTTTACATTGCTCAATTTTTTGATTAACTCTAAGAGT
TTAGTTGCTACCTCAGGTCCACAGGCAGGACTTCCTCCAACCCTCTTGTCCCCTGTTGCTTTCCGAGGTG
CCACAATGCAAATGCTTAAGGCACGGAGTGTGAATGTGAAGACACAAGCTCTTTCTGGATACAGAGACCA
ATTTAGTTTGGAGATTACAGGTCCTATCATGCCTCATTCTCTGCATTCACTGACCATGCTGCTCAAATCT
TCACAGAGTGGATCTTTCTCTGCAGTACTGTATCCACACGAGCCAACTGCTGTATTTAACATCTGCCTGC
AAATGGACAAAGTACTTGATATGGAGGTTGTTCATAAGGAGCTTACTAACTGTGGTTTGCACCCTAACAC
TCTGGAGCAACTTAGTCAAATACCGTTACTTGGGAAATCATCTTTACGGAATGTGGTGCTGAGAGACTAC
ATTTATAATTGGAGATCCTGA

Translation (566 aa):
MALSVPGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLPLRPFPAAGGRGGGSGG
GPAAARRNPFARLDNRPRVAAEPPDGPAREQPEAPVPFLDSNQENDLLWEEKFPERTTVTELPQTSHVSF
SEPDIPSSKSTELPVDWSIKTRLLFTSSQPFTWADHLKAQEEAQGLVQHCRATEVTLPKSIQDPKLSSEL
RCTFQQSLIYWLHPALSWLPLFPRIGADRKMAGKTSPWSNDATLQHVLMSDWSVSFTSLYNLLKTKLCPY
FYVCTYQFTVLFRAAGLAGSDLITALISPTTRGLREAMRNEGIEFSLPLIKESGHKKETASGTSLGYGEE
QAISDEDEEESFSWLEEMGVQDKIKKPDILSIKLRKEKHEVQMDHRPESVVLVKGINTFTLLNFLINSKS
LVATSGPQAGLPPTLLSPVAFRGATMQMLKARSVNVKTQALSGYRDQFSLEITGPIMPHSLHSLTMLLKS
SQSGSFSAVLYPHEPTAVFNICLQMDKVLDMEVVHKELTNCGLHPNTLEQLSQIPLLGKSSLRNVVLRDY
IYNWRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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