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Report for CCDS13592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13592.1 Public Homo sapiens 21 KRTAP13-4 24 110 108 CCDS HistoryNCBI Gene:284827Re-query CCDS DB by CCDS ID:13592.1Re-query CCDS DB by GeneID:284827See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13592.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334068.4 ENSP00000334834.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334068.4Link to Ensembl Protein Viewer:ENSP00000334834.2Re-query CCDS DB by Nucleotide ID:ENST00000334068Re-query CCDS DB by Protein ID:ENSP00000334834
Original member Current member NCBI NM_181600.3 NP_853631.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181600.3Link to Protein Sequence:NP_853631.1Re-query CCDS DB by Nucleotide ID:NM_181600Re-query CCDS DB by Protein ID:NP_853631Link to BLAST:NP_853631.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_853631.1 160 Q3LI77 160 100% 0 0

Chromosomal Locations for CCDS 13592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 30430276 30430758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGTCCTACAACTGCTGCTCTAGAAACTTCTCCTCCCGCTCCTTTGGGGGCTACCTGTACTACCCAGGCT
CCTACCCCAGCAGCCTGGTCTACAGCACTGCCCTCTGCTCTCCCAGCACCTGCCAGCTGCGTTCCTCTCT
CTACAGGGACTGTCAGAAGACCTGCTGGGAGCCCGCCAGCTGCCAGAAATCCTGCTACCGCCCCAGGACC
TCCATCCTCTGCTGTCCCTGTCAGACGACTTGCTCTGGATCTCTAGGCTTTCGGTCCAGCAGCTGTCGCT
CCCAGGGCTATGGATCTAGGTGCTGCTACTCGCTGGGAAATGGATCCAGTGGCTTCAGATTCCTGAAATA
TGGAGGCTGTGGTTTTCCTTCCCTGAGTTACGGATCCAGATTCTGCTACCCAAACTACTTGGCTTCTGGA
GCCTGGCAGTCTTCTTGTTACAGACCAATCTGTGGATCTCGCTTCTATCAATTCACCTGCTAA

Translation (160 aa):
MSYNCCSRNFSSRSFGGYLYYPGSYPSSLVYSTALCSPSTCQLRSSLYRDCQKTCWEPASCQKSCYRPRT
SILCCPCQTTCSGSLGFRSSSCRSQGYGSRCCYSLGNGSSGFRFLKYGGCGFPSLSYGSRFCYPNYLASG
AWQSSCYRPICGSRFYQFTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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