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Report for CCDS12861.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12861.1 Public Homo sapiens 19 ZNF677 24 110 108 CCDS HistoryNCBI Gene:342926Re-query CCDS DB by CCDS ID:12861.1Re-query CCDS DB by GeneID:342926See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12861.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333952.8 ENSP00000334394.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333952.8Link to Ensembl Protein Viewer:ENSP00000334394.4Re-query CCDS DB by Nucleotide ID:ENST00000333952Re-query CCDS DB by Protein ID:ENSP00000334394
Original member Current member EBI ENST00000598513.6 ENSP00000469391.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598513.6Link to Ensembl Protein Viewer:ENSP00000469391.1Re-query CCDS DB by Nucleotide ID:ENST00000598513Re-query CCDS DB by Protein ID:ENSP00000469391
Original member Current member NCBI NM_001317998.2 NP_001304927.1 Accepted alive Link to Nucleotide Sequence:NM_001317998.2Link to Protein Sequence:NP_001304927.1Re-query CCDS DB by Nucleotide ID:NM_001317998Re-query CCDS DB by Protein ID:NP_001304927Link to BLAST:NP_001304927.1
Original member Current member NCBI NM_001385608.1 NP_001372537.1 Accepted alive Link to Nucleotide Sequence:NM_001385608.1Link to Protein Sequence:NP_001372537.1Re-query CCDS DB by Nucleotide ID:NM_001385608Re-query CCDS DB by Protein ID:NP_001372537Link to BLAST:NP_001372537.1
Original member Current member NCBI NM_182609.4 NP_872415.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182609.4Link to Protein Sequence:NP_872415.1Re-query CCDS DB by Nucleotide ID:NM_182609Re-query CCDS DB by Protein ID:NP_872415Link to BLAST:NP_872415.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304927.1 584 Q86XU0 584 100% 0 0
NP_001372537.1 584 Q86XU0 584 100% 0 0
NP_872415.1 584 Q86XU0 584 100% 0 0

Chromosomal Locations for CCDS 12861.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53236972 53238557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53243744 53243897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53251536 53251550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1755 nt):
ATGGCTCTTTCTCAGGGACTGTTTACATTCAAGGATGTGGCCATAGAATTCTCTCAAGAGGAGTGGGAGT
GCCTGGACCCTGCCCAGAGGGCCTTGTACAGGGACGTGATGTTGGAGAACTACAGGAACCTGCTTTCTCT
CGATGAGGATAACATCCCTCCAGAAGATGATATTTCTGTTGGATTTACAAGCAAGGGATTATCACCAAAG
GAAAATAATAAAGAGGAATTATACCATCTGGTGATATTAGAAAGAAAGGAAAGCCATGGCATCAACAATT
TTGACCTCAAGGAAGTCTGGGAAAATATGCCTAAGTTTGACAGCCTGTGGGACTATGATGTAAAAAATTA
CAAAGGAATGCCTTTGACCTGTAACAAAAATCTCACTCACAGAAAAGATCAACAACATAATAAATCCTCA
ATACATTTCTCTTTAAAGCAGAGTGTTTCTATAAGAGATAGTGCACACCAGTATTTCATCCATGACAAGC
CATTTATAAGGAATTTGTTAAAACTGAAAAATAACATAAGGTATGCCGGAAACAAATACGTGAAGTGTTT
TGAAAATAAAATTGGATTAAGCTTACAGGCACAGCTGGCTGAACTACAGAGATTTCAAACTGGGGAGAAA
ATGTATGAATGTAATCCAGTTGAGAAGTCTATCAATAGTTCCTCAGTTTCACCACTTCCTCCTTGTGTCA
AAAACATTTGTAATAAATATAGGAAGATTTTGAAATACCCTTTATTACATACACAGTATGGGAGAACACA
CATTAGAGAAAAATCATACAAGTGTAATGACTGTGGAAAGGCTTTTAGCAAAAGTTCGAACCTCACTAAT
CATCAGAGAATTCACTCTGGACAGAGACCTTACAAATGTAACGAGTGTGGCAAAGCCTTTAACCAGTGTT
CGAACCTCACTAGGCATCAGAGAGTCCATACAGGAGAGAAACCATATCAATGTAATATATGTGGCAAGGT
CTGTAGTCAAAATTCAAATCTTGCAAGTCATCAGAGGATGCATACTGGAGAGAAACCTTACAAATGTAAT
GAATGTGGTAAGGCATTTATCCAGCGTTCACACCTTTGGGGTCATGAAAGAATTCATACTGGAGAGAAAC
CTTACAAATGTAATGAATGTGACAAAGCCTTTGCTGAACGTTCAAGCCTTACCCAACATAAGAGAATCCA
TACTGGAGAGAAGCCTTACATATGTAATGAGTGTGGCAAAGCTTTTAAGCAGTGCTCACATCTCACTAGG
CATCAGAATATACATCCTGGAGAGAAACCACACAAATGTAATGTGTGTGGCAGGGCTTTTATCCAAAGTT
CAAGTCTTGTGGAACATCAGAGAATTCACACTGGAGAAAAACCTTACAAATGTAATAAATGTGATAAAGC
TTTTATCAAACGTTCACACCTTTGGGGTCATCAGAGAACTCATACTGGAGAGAAACCTTACAAATGTACT
GAATGTGGCAAAGCCTTTACTGAACGTTCAAATCTTACTCAGCATAAGAAAATCCATACTGGAGAGAAAC
CTTACAAATGTACTGAATGTGGCAAAGCTTTTACCCAATTTGCAAACCTCACTAGACACCAGAAAATACA
CATTGAAAAGAAACATTGTAAACATAATATACATGGTAATGCTTTATTCCAAAGTTCAAACCTTGGAGAT
CATCAAAAAAGTTATAATAGAGAAAAACATATCAAATATAATGAGACAAAAATTAAGTATTCAAGCTGTA
CCTAG

Translation (584 aa):
MALSQGLFTFKDVAIEFSQEEWECLDPAQRALYRDVMLENYRNLLSLDEDNIPPEDDISVGFTSKGLSPK
ENNKEELYHLVILERKESHGINNFDLKEVWENMPKFDSLWDYDVKNYKGMPLTCNKNLTHRKDQQHNKSS
IHFSLKQSVSIRDSAHQYFIHDKPFIRNLLKLKNNIRYAGNKYVKCFENKIGLSLQAQLAELQRFQTGEK
MYECNPVEKSINSSSVSPLPPCVKNICNKYRKILKYPLLHTQYGRTHIREKSYKCNDCGKAFSKSSNLTN
HQRIHSGQRPYKCNECGKAFNQCSNLTRHQRVHTGEKPYQCNICGKVCSQNSNLASHQRMHTGEKPYKCN
ECGKAFIQRSHLWGHERIHTGEKPYKCNECDKAFAERSSLTQHKRIHTGEKPYICNECGKAFKQCSHLTR
HQNIHPGEKPHKCNVCGRAFIQSSSLVEHQRIHTGEKPYKCNKCDKAFIKRSHLWGHQRTHTGEKPYKCT
ECGKAFTERSNLTQHKKIHTGEKPYKCTECGKAFTQFANLTRHQKIHIEKKHCKHNIHGNALFQSSNLGD
HQKSYNREKHIKYNETKIKYSSCT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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