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Report for CCDS12773.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12773.1 Public Homo sapiens 19 PRRG2 24 110 108 CCDS HistoryNCBI Gene:5639Re-query CCDS DB by CCDS ID:12773.1Re-query CCDS DB by GeneID:5639See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12773.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000246794.10 ENSP00000246794.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000246794.10Link to Ensembl Protein Viewer:ENSP00000246794.4Re-query CCDS DB by Nucleotide ID:ENST00000246794Re-query CCDS DB by Protein ID:ENSP00000246794
Original member Current member NCBI NM_000951.3 NP_000942.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000951.3Link to Protein Sequence:NP_000942.1Re-query CCDS DB by Nucleotide ID:NM_000951Re-query CCDS DB by Protein ID:NP_000942Link to BLAST:NP_000942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000942.1 202 O14669 202 100% 0 0

Chromosomal Locations for CCDS 12773.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49583220 49583304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49583542 49583717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49583913 49583952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49588497 49588632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49589900 49590052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49590371 49590389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGAGGGGCCACCCCTCTCTGCTGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTG
AGGAGACAGACCAAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGAT
TCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCTGGAACGGGAGTGTCTGGAAGAG
AGGTGTTCCTGGGAAGAGGCCAGGGAGTATTTTGAGGACAACACTCTCACGGAGCGCTTTTGGGAGAGCT
ACATCTACAATGGCAAAGGAGGGCGTGGACGAGTGGATGTGGCCAGCCTGGCTGTGGGGCTGACAGGTGG
CATCCTGCTCATTGTCCTGGCCGGCCTGGGAGCCTTTTGGTATCTGCGCTGGCGACAGCACCGAGGCCAG
CAGCCCTGTCCCCAAGAGGCCGGGCTCATTAGCCCTCTGAGTCCTTTGAACCCTCTGGGCCCACCGACGC
CCCTGCCTCCACCCCCACCCCCACCCCCAGGCCTCCCCACCTATGAGCAGGCGCTGGCAGCCTCTGGGGT
ACACGACGCACCTCCACCCCCCTACACCAGCCTCAGGAGGCCTCACTGA

Translation (202 aa):
MRGHPSLLLLYMALTTCLDTSPSEETDQEVFLGPPEAQSFLSSHTRIPRANHWDLELLTPGNLERECLEE
RCSWEEAREYFEDNTLTERFWESYIYNGKGGRGRVDVASLAVGLTGGILLIVLAGLGAFWYLRWRQHRGQ
QPCPQEAGLISPLSPLNPLGPPTPLPPPPPPPPGLPTYEQALAASGVHDAPPPPYTSLRRPH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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