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Report for CCDS12693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12693.1 Public Homo sapiens 19 AP2S1 24 110 108 CCDS HistoryNCBI Gene:1175Re-query CCDS DB by CCDS ID:12693.1Re-query CCDS DB by GeneID:1175See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12693.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000601649.1 ENSP00000470898.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601649.1Link to Ensembl Protein Viewer:ENSP00000470898.1Re-query CCDS DB by Nucleotide ID:ENST00000601649Re-query CCDS DB by Protein ID:ENSP00000470898
Original member Current member NCBI NM_021575.5 NP_067586.1 Accepted alive Link to Nucleotide Sequence:NM_021575.5Link to Protein Sequence:NP_067586.1Re-query CCDS DB by Nucleotide ID:NM_021575Re-query CCDS DB by Protein ID:NP_067586Link to BLAST:NP_067586.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067586.1 104 P53680-2 104 100% 0 0

Chromosomal Locations for CCDS 12693.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46838447 46838548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46838740 46838799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46845993 46846142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46850764 46850766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGATCCGCTTTATCCTCATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTTTG
ATGATGATGAGAAACAGAAGCTGATCGAGGAGGTGCATGCCGTGGTCACCGTCCGAGACGCCAAACACAC
CAACTTTGTGGAGGTCTTAAACGAATATTTCCACAATGTCTGTGAACTGGACCTGGTGTTCAACTTCTAC
AAGGTTTACACGGTCGTGGACGAGATGTTCCTGGCTGGCGAAATCCGAGAGACCAGCCAGACGAAGGTGC
TGAAACAGCTGCTGATGCTACAGTCCCTGGAGTGA

Translation (104 aa):
MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEVLNEYFHNVCELDLVFNFY
KVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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