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Report for CCDS12467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12467.1 Public Homo sapiens 19 ATP4A 24 110 108 CCDS HistoryNCBI Gene:495Re-query CCDS DB by CCDS ID:12467.1Re-query CCDS DB by GeneID:495See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262623.4 ENSP00000262623.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262623.4Link to Ensembl Protein Viewer:ENSP00000262623.2Re-query CCDS DB by Nucleotide ID:ENST00000262623Re-query CCDS DB by Protein ID:ENSP00000262623
Original member Current member NCBI NM_000704.3 NP_000695.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000704.3Link to Protein Sequence:NP_000695.2Re-query CCDS DB by Nucleotide ID:NM_000704Re-query CCDS DB by Protein ID:NP_000695Link to BLAST:NP_000695.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000695.2 1035 P20648 1035 100% 0 0

Chromosomal Locations for CCDS 12467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35550615 35550643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35550834 35550925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35551010 35551111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35551447 35551580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35553037 35553182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35553706 35553829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35554922 35555076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35555166 35555334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35555440 35555590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35555676 35555812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35556913 35557088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35557655 35557847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35558362 35558496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35558577 35558686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35558993 35559191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35559805 35560073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35560363 35560615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35560819 35560932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35562435 35562638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35563209 35563268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35563384 35563527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35563618 35563629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3108 nt):
ATGGGGAAGGCCGAGAACTATGAGCTCTACTCGGTGGAGCTGGGTCCTGGCCCTGGCGGGGACATGGCTG
CCAAGATGAGCAAGAAGAAGAAGGCGGGTGGCGGGGGTGGCAAGAGGAAGGAGAAGCTGGAGAACATGAA
GAAGGAGATGGAGATTAACGACCACCAGCTGTCAGTGGCGGAGCTGGAACAGAAATACCAGACCAGTGCC
ACCAAGGGCCTCTCTGCGAGCCTGGCTGCTGAGCTGCTGCTGCGGGATGGGCCCAACGCACTGCGGCCAC
CACGGGGCACCCCAGAGTACGTCAAGTTCGCGAGGCAGCTGGCCGGGGGCCTGCAGTGCCTCATGTGGGT
TGCCGCCGCCATCTGCCTCATCGCCTTTGCCATCCAGGCTAGTGAGGGGGACCTCACCACCGACGACAAT
CTGTACCTGGCAATCGCTCTCATTGCTGTGGTTGTCGTCACCGGCTGCTTTGGCTACTACCAGGAATTCA
AGAGCACCAACATCATCGCCAGCTTTAAGAACCTTGTGCCACAGCAAGCCACTGTCATCCGCGATGGAGA
CAAATTCCAGATCAACGCTGACCAACTGGTGGTGGGCGACCTGGTGGAGATGAAAGGTGGGGACAGAGTG
CCCGCCGACATCCGCATCCTGGCGGCCCAGGGCTGCAAGGTGGACAACTCCTCGCTGACAGGGGAGTCTG
AGCCACAGACCCGCTCACCCGAGTGCACGCACGAGAGCCCTCTGGAGACCCGCAACATCGCCTTCTTCTC
CACCATGTGCCTTGAGGGCACCGTGCAGGGCCTGGTGGTGAACACGGGCGACCGCACCATCATTGGGCGC
ATCGCATCGCTGGCGTCGGGGGTGGAAAACGAGAAGACACCCATCGCTATCGAGATCGAGCATTTTGTGG
ACATCATCGCGGGCCTGGCCATTCTCTTCGGTGCCACATTTTTTATTGTGGCCATGTGCATTGGCTACAC
CTTCCTGCGGGCCATGGTCTTCTTCATGGCCATCGTGGTGGCCTATGTGCCTGAGGGGCTGCTGGCCACT
GTCACAGTCTGCCTGTCCCTGACAGCCAAGCGCCTGGCCAGTAAGAACTGCGTGGTCAAGAACCTGGAGG
CGGTGGAGACATTGGGCTCCACTTCGGTGATCTGCTCGGACAAGACAGGGACTCTCACTCAGAACCGCAT
GACTGTGTCCCATCTGTGGTTTGACAACCACATCCACACAGCTGACACCACGGAAGACCAGTCAGGGCAG
ACGTTTGACCAGTCCTCGGAGACGTGGCGGGCGCTGTGCCGGGTGCTCACCCTGTGCAACCGCGCCGCCT
TCAAGTCCGGCCAGGATGCAGTGCCTGTGCCCAAGCGCATCGTGATTGGAGACGCATCGGAGACGGCGCT
GCTCAAGTTCTCGGAGCTGACGCTGGGCAACGCCATGGGCTACCGGGACCGCTTCCCAAAAGTCTGCGAG
ATACCCTTCAACTCCACCAACAAGTTCCAGCTGTCCATCCATACGCTGGAGGACCCGCGGGACCCGCGAC
ACTTGCTGGTGATGAAGGGCGCCCCCGAGCGCGTGCTGGAGCGCTGCAGCTCCATCCTTATCAAGGGCCA
GGAGCTGCCGCTGGACGAGCAGTGGCGCGAGGCCTTCCAGACCGCCTACCTCAGCCTGGGAGGCCTGGGC
GAACGCGTGCTCGGCTTCTGCCAGCTCTACCTGAATGAGAAGGACTACCCGCCTGGCTATGCCTTCGACG
TAGAGGCCATGAACTTTCCATCTAGCGGCCTCTGCTTTGCGGGACTTGTATCCATGATTGACCCACCCCG
GGCCACCGTCCCTGATGCTGTGCTCAAGTGTCGCACCGCAGGCATCCGGGTGATCATGGTAACGGGTGAC
CACCCCATCACCGCCAAGGCCATTGCAGCCAGTGTGGGCATCATCTCGGAAGGCAGCGAGACAGTGGAGG
ACATCGCTGCCCGCCTCCGTGTGCCCGTAGACCAGGTTAATCGCAAGGATGCCCGTGCCTGTGTGATCAA
TGGCATGCAGCTGAAGGACATGGACCCATCGGAACTGGTCGAGGCCCTGCGCACCCACCCCGAGATGGTG
TTTGCGCGCACCAGCCCCCAGCAGAAGCTGGTGATCGTGGAGAGCTGCCAGCGGCTGGGTGCGATTGTGG
CCGTCACGGGGGATGGTGTGAATGACTCCCCAGCTCTGAAGAAGGCAGACATCGGAGTAGCCATGGGCAT
CGCTGGCTCAGATGCTGCCAAAAATGCAGCTGACATGATCCTGCTGGATGACAACTTTGCCTCCATTGTG
ACAGGCGTGGAGCAGGGTCGACTGATCTTCGACAACCTGAAGAAGTCTATTGCCTACACATTGACCAAGA
ACATCCCAGAGCTGACACCCTACCTCATCTACATCACCGTCAGCGTGCCCCTGCCCCTCGGGTGCATCAC
CATCCTCTTCATCGAACTCTGCACTGACATTTTCCCATCTGTGTCCCTGGCATATGAAAAGGCCGAGAGT
GACATCATGCACCTGCGTCCACGCAACCCAAAGCGTGACAGATTGGTCAACGAGCCCCTGGCTGCCTACT
CCTACTTCCAGATTGGTGCCATTCAGTCCTTTGCTGGCTTCACTGACTACTTCACGGCAATGGCCCAGGA
GGGCTGGTTCCCACTGCTGTGCGTGGGGCTGCGGGCGCAGTGGGAGGACCACCACCTACAAGATCTGCAG
GACAGCTACGGCCAGGAGTGGACATTCGGGCAGCGCCTGTACCAGCAGTACACCTGCTACACCGTGTTCT
TCATCAGCATTGAGGTGTGCCAGATCGCCGATGTCCTCATCCGCAAGACGCGCCGTCTCTCTGCCTTCCA
GCAAGGCTTCTTCAGGAATAAGATCCTGGTGATCGCCATCGTGTTCCAGGTCTGCATCGGCTGCTTCCTG
TGCTACTGCCCCGGCATGCCCAACATCTTCAACTTCATGCCCATTCGGTTCCAGTGGTGGCTGGTCCCCC
TGCCCTACGGCATCCTCATCTTCGTCTATGATGAGATCCGGAAGCTTGGAGTTCGCTGTTGCCCAGGGAG
CTGGTGGGACCAGGAACTCTACTATTAG

Translation (1035 aa):
MGKAENYELYSVELGPGPGGDMAAKMSKKKKAGGGGGKRKEKLENMKKEMEINDHQLSVAELEQKYQTSA
TKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDN
LYLAIALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRV
PADIRILAAQGCKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTVQGLVVNTGDRTIIGR
IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLAT
VTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHTADTTEDQSGQ
TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRDRFPKVCE
IPFNSTNKFQLSIHTLEDPRDPRHLLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLG
ERVLGFCQLYLNEKDYPPGYAFDVEAMNFPSSGLCFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGD
HPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMV
FARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIV
TGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAES
DIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRAQWEDHHLQDLQ
DSYGQEWTFGQRLYQQYTCYTVFFISIEVCQIADVLIRKTRRLSAFQQGFFRNKILVIAIVFQVCIGCFL
CYCPGMPNIFNFMPIRFQWWLVPLPYGILIFVYDEIRKLGVRCCPGSWWDQELYY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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