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Report for CCDS11398.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11398.1 Public Homo sapiens 17 KRT15 24 110 108 CCDS HistoryNCBI Gene:3866Re-query CCDS DB by CCDS ID:11398.1Re-query CCDS DB by GeneID:3866See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11398.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254043.8 ENSP00000254043.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254043.8Link to Ensembl Protein Viewer:ENSP00000254043.3Re-query CCDS DB by Nucleotide ID:ENST00000254043Re-query CCDS DB by Protein ID:ENSP00000254043
Original member Current member EBI ENST00000393976.6 ENSP00000377546.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393976.6Link to Ensembl Protein Viewer:ENSP00000377546.1Re-query CCDS DB by Nucleotide ID:ENST00000393976Re-query CCDS DB by Protein ID:ENSP00000377546
Original member Current member NCBI NM_002275.4 NP_002266.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002275.4Link to Protein Sequence:NP_002266.3Re-query CCDS DB by Nucleotide ID:NM_002275Re-query CCDS DB by Protein ID:NP_002266Link to BLAST:NP_002266.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002266.3 456 P19012-1 456 100% 0 0

Chromosomal Locations for CCDS 11398.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41514023 41514120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41514649 41514674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41515472 41515692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41515885 41516010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41516104 41516265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41516808 41516964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41517083 41517165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41518330 41518827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGACCACCACATTTCTGCAAACTTCTTCCTCCACCTTTGGGGGTGGCTCAACCCGAGGGGGTTCCCTCC
TGGCTGGGGGAGGTGGCTTTGGTGGGGGGAGTCTCTCTGGGGGAGGTGGAAGCCGAAGTATCTCAGCTTC
TTCTGCTAGGTTTGTCTCTTCAGGGTCAGGAGGAGGATATGGGGGTGGCATGAGGGTCTGTGGCTTTGGT
GGAGGGGCTGGTAGTGTTTTCGGTGGAGGCTTTGGAGGGGGCGTTGGTGGGGGTTTTGGTGGTGGCTTTG
GTGGTGGCGATGGTGGTCTCCTCTCTGGCAATGAGAAAATTACCATGCAGAACCTCAATGACCGCCTGGC
CTCCTACCTGGACAAGGTACGTGCCCTGGAGGAGGCCAATGCTGACCTGGAGGTGAAGATCCATGACTGG
TACCAGAAGCAGACCCCAACCAGCCCAGAATGCGACTACAGCCAATACTTCAAGACCATTGAAGAGCTCC
GGGACAAGATCATGGCCACCACCATCGACAACTCCCGGGTCATCCTGGAGATCGACAATGCCAGGCTGGC
TGCGGACGACTTCAGGCTCAAGTATGAGAATGAGCTGGCCCTGCGCCAGGGCGTTGAGGCTGACATCAAC
GGCTTGCGCCGAGTCCTGGATGAGCTGACCCTGGCCAGGACTGACCTGGAGATGCAGATCGAGGGCCTGA
ATGAGGAGCTAGCCTACCTGAAGAAGAACCACGAAGAGGAGATGAAGGAGTTCAGCAGCCAGCTGGCCGG
CCAGGTCAATGTGGAGATGGACGCAGCACCGGGTGTGGACCTGACCCGTGTGCTGGCAGAGATGAGGGAG
CAGTACGAGGCCATGGCGGAGAAGAACCGCCGGGATGTCGAGGCCTGGTTCTTCAGCAAGACTGAGGAGC
TGAACAAAGAGGTGGCCTCCAACACAGAAATGATCCAGACCAGCAAGACGGAGATCACAGACCTGAGACG
CACGATGCAGGAGCTGGAGATCGAGCTGCAGTCCCAGCTCAGCATGAAAGCTGGGCTGGAGAACTCACTG
GCCGAGACAGAGTGCCGCTATGCCACGCAGCTGCAGCAGATCCAGGGGCTCATTGGTGGCCTGGAGGCCC
AGCTGAGTGAGCTCCGATGCGAGATGGAGGCTCAGAACCAGGAGTACAAGATGCTGCTTGACATAAAGAC
ACGGCTGGAGCAGGAGATCGCTACTTACCGCAGCCTGCTCGAGGGCCAGGATGCCAAGATGGCTGGCATT
GCCATCAGGGAAGCCTCTTCAGGAGGTGGTGGTAGCAGCAGCAATTTCCACATCAATGTAGAAGAGTCAG
TGGATGGACAGGTGGTTTCTTCCCACAAGAGAGAAATCTAA

Translation (456 aa):
MTTTFLQTSSSTFGGGSTRGGSLLAGGGGFGGGSLSGGGGSRSISASSARFVSSGSGGGYGGGMRVCGFG
GGAGSVFGGGFGGGVGGGFGGGFGGGDGGLLSGNEKITMQNLNDRLASYLDKVRALEEANADLEVKIHDW
YQKQTPTSPECDYSQYFKTIEELRDKIMATTIDNSRVILEIDNARLAADDFRLKYENELALRQGVEADIN
GLRRVLDELTLARTDLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMRE
QYEAMAEKNRRDVEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQELEIELQSQLSMKAGLENSL
AETECRYATQLQQIQGLIGGLEAQLSELRCEMEAQNQEYKMLLDIKTRLEQEIATYRSLLEGQDAKMAGI
AIREASSGGGGSSSNFHINVEESVDGQVVSSHKREI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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