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Report for CCDS10835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10835.1 Public Homo sapiens 16 TPPP3 24 110 108 CCDS HistoryNCBI Gene:51673Re-query CCDS DB by CCDS ID:10835.1Re-query CCDS DB by GeneID:51673See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10835.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290942.9 ENSP00000290942.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000290942.9Link to Ensembl Protein Viewer:ENSP00000290942.5Re-query CCDS DB by Nucleotide ID:ENST00000290942Re-query CCDS DB by Protein ID:ENSP00000290942
Original member Current member EBI ENST00000393957.7 ENSP00000377529.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393957.7Link to Ensembl Protein Viewer:ENSP00000377529.2Re-query CCDS DB by Nucleotide ID:ENST00000393957Re-query CCDS DB by Protein ID:ENSP00000377529
Original member Current member EBI ENST00000562206.1 ENSP00000457275.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562206.1Link to Ensembl Protein Viewer:ENSP00000457275.1Re-query CCDS DB by Nucleotide ID:ENST00000562206Re-query CCDS DB by Protein ID:ENSP00000457275
Original member Current member EBI ENST00000564104.5 ENSP00000462435.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564104.5Link to Ensembl Protein Viewer:ENSP00000462435.1Re-query CCDS DB by Nucleotide ID:ENST00000564104Re-query CCDS DB by Protein ID:ENSP00000462435
Original member Current member NCBI NM_015964.4 NP_057048.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015964.4Link to Protein Sequence:NP_057048.2Re-query CCDS DB by Nucleotide ID:NM_015964Re-query CCDS DB by Protein ID:NP_057048Link to BLAST:NP_057048.2
Original member Current member NCBI NM_016140.4 NP_057224.2 Accepted alive Link to Nucleotide Sequence:NM_016140.4Link to Protein Sequence:NP_057224.2Re-query CCDS DB by Nucleotide ID:NM_016140Re-query CCDS DB by Protein ID:NP_057224Link to BLAST:NP_057224.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057048.2 176 Q9BW30 176 100% 0 0
NP_057224.2 176 Q9BW30 176 100% 0 0

Chromosomal Locations for CCDS 10835.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67390174 67390362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67390479 67390632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67390924 67391111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCAGCGAGCACAGACATGGCTGGGCTGGAGGAGAGCTTCCGCAAGTTTGCCATCCATGGTGACCCCA
AGGCCAGTGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCTGTGCAAGGACTGCAAGGTGGCTGACGG
AAAGTCCGTGACAGGGACCGATGTGGACATCGTCTTCTCCAAAGTCAAGGGGAAGTCTGCTCGGGTCATC
AACTATGAGGAGTTCAAGAAGGCCCTGGAAGAGCTGGCGACCAAGAGATTCAAGGGGAAGAGCAAGGAGG
AGGCCTTCGATGCCATCTGCCAGCTGGTGGCAGGCAAAGAGCCAGCCAATGTGGGCGTCACTAAAGCAAA
AACAGGGGGTGCTGTAGACCGGCTGACGGACACCAGCAGATACACGGGCTCCCACAAGGAGCGCTTCGAT
GAGAGCGGCAAGGGCAAGGGCATTGCGGGACGGCAGGACATCCTGGACGACAGTGGCTACGTGAGCGCCT
ACAAGAATGCAGGCACCTACGATGCCAAGGTGAAGAAGTGA

Translation (176 aa):
MAASTDMAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVI
NYEEFKKALEELATKRFKGKSKEEAFDAICQLVAGKEPANVGVTKAKTGGAVDRLTDTSRYTGSHKERFD
ESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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