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Report for CCDS10520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10520.1 Public Homo sapiens 16 ANKS3 24 110 108 CCDS HistoryNCBI Gene:124401Re-query CCDS DB by CCDS ID:10520.1Re-query CCDS DB by GeneID:124401See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304283.9 ENSP00000304586.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304283.9Link to Ensembl Protein Viewer:ENSP00000304586.4Re-query CCDS DB by Nucleotide ID:ENST00000304283Re-query CCDS DB by Protein ID:ENSP00000304586
Original member Current member EBI ENST00000614075.4 ENSP00000480350.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614075.4Link to Ensembl Protein Viewer:ENSP00000480350.1Re-query CCDS DB by Nucleotide ID:ENST00000614075Re-query CCDS DB by Protein ID:ENSP00000480350
Original member Current member NCBI NM_133450.4 NP_597707.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133450.4Link to Protein Sequence:NP_597707.1Re-query CCDS DB by Nucleotide ID:NM_133450Re-query CCDS DB by Protein ID:NP_597707Link to BLAST:NP_597707.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_597707.1 656 Q6ZW76-1 656 100% 0 0

Chromosomal Locations for CCDS 10520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4697028 4697104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4697333 4697416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4697977 4698062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4698427 4698599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4698800 4698941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4699052 4699176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4700970 4701134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4701434 4701543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4702102 4702242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4705095 4705253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4714051 4714186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4724750 4724831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4726659 4726780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4726979 4727177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4729980 4730149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1971 nt):
ATGTCCGAGCTCAGCGATGAAGCCAGCGAGCCGGAACTCCTGAACCGCAGCTTGTCCATGTGGCACGGGC
TCGGGACACAGGTCAGCGGGGAGGAGCTGGATGTCCCCCTGGATCTTCACACAGCTGCTTCCATTGGCCA
GTATGAAGTGGTGAAGGAGTGTGTGCAGCGGAGAGAGTTAGATTTGAATAAGAAGAATGGTGGTGGCTGG
ACCCCGCTGATGTATGCCTCCTACATTGGCCACGACACAATCGTGCACCTGCTGCTTGAGGCGGGGGTGA
GTGTGAATGTGCCGACCCCAGAAGGGCAGACTCCACTGATGCTGGCCTCCAGCTGTGGCAACGAGAGCAT
CGCCTACTTTCTTCTCCAGCAAGGTGCAGAGCTAGAAATGAAAGACATCCAGGGCTGGACAGCCCTCTTC
CACTGTACCAGCGCCGGGCACCAGCACATGGTCAGGTTCCTCTTGGACAGTGGAGCCAATGCCAACGTGA
GGGAGCCGATATGTGGATTTACTCCCTTGATGGAAGCAGCTGCTGCTGGCCATGAGATAATCGTGCAGTA
TTTTCTGAATCACGGAGTCAAGGTGGACGCGAGAGACCACAGTGGAGCCACAGCCCGGATGCTGGCCAAG
CAGTACGGACACATGAAGATCGTGGCCTTGATGGACACTTACTCGCCCTCTCTGCCCAAGAGCCTCTATC
GGAGCCCAGAAAAGTACGAAGATCTGAGCTCTTCTGACGAGTCCTGCCCTGCTCCTCAGAGACAGAGGCC
TTGCCGGAAGAAGGGTGTCAGCATCCACGAGGGACCGCGAGCCCTGGCCAGGATCACAGGCATTGGCCTG
GGCGGCAGAGCCCCACGGCCTCGCTATGAGCAGGCTCCTCCCCGTGGCTATGTCACCTTCAACAGCAGTG
GCGAGAACCCCCTGGAAGAAGAGGGCCTCTGCTGCCGGGATGTCACCTCCCCCATCAATGAGCGGGATGT
GGAGAGCAGCAGCAGCAGCAGCAGTCGGGAGGAACATGCTTTCTGTGCCAACCTGGGGCCCGTCCAGAGC
AGCAGCAGCAGCGAGGGCCTGGCCAGAGCCCAGGGGCTCAGCAGCGAAGCTTCTGTGGAGAGCAACGAGG
ACTCGGATCATGCCTGTAAAAGCTCAGCTCGCAAACAAGCTAAAAGTTACATGAAGACCAAGAATCCTGA
CAGCCAGTGGCCTCCCCGCGCTGCAACTGACAGGGAAGGCTTTCTCGCTGAGTCCAGCCCCCAGACTCAG
AGGGCCCCCTACTCAGGACCCCAGGACCTTGCCGCACTGCTGGAGCAGATCGGGTGTCTGAAGTACCTGC
AGGTGTTTGAGGAGCAGGACGTGGACCTCCGCATCTTTCTGACCCTCACTGAGAGCGACCTGAAGGAAAT
TGGCATCACGCTGTTTGGGCCCAAGAGGAAGATGACGTCCGCCATTGCCCGCTGGCACAGCAGTGCCCGC
CCACCCGGGGATGCCCTGGAGCTGGCCTACGCCGACCGGCTGGAGGCTGAGATGCAGGAGCTCGCCATCC
AGCTGCACAAGCGCTGCGAGGAGGTAGAGGCCACGCGGGGCCAGGTGTGTCAGGAGCAGGAGCTGCGCGC
CGTGGTGGAGAGCTGCCTGCTGGAGCAGGACCGCGCCCGCGAGGACCTCCAGGCCCGGCTGCGGGAGACG
TGGGCCCTGGCCCGGGATGCTGCCCTCGTCCTGGACCAGCTGCGAGCCTGTCAAGCTGAGCTGTCATCTC
GAGTGAGGCAGGACCAGCCCCCTGGTGCAGCCACTCTGGGCCTAGCCGTCCCCCCAGCTGACTCCAAGGG
CTGGCAAGCGTCCCTGCAGGCCATGAGCCTCCCCGAGCTCTCGGGAGCCCTGGAGGACCGTGTCCGTGAG
ATGGGGCAAGCACTGTGCTTAGTGACCCAGAGCCTGGAGAAGCTGCAGGTGCTGAACGGGAAGAAGTGGC
GGGAGACCTAG

Translation (656 aa):
MSELSDEASEPELLNRSLSMWHGLGTQVSGEELDVPLDLHTAASIGQYEVVKECVQRRELDLNKKNGGGW
TPLMYASYIGHDTIVHLLLEAGVSVNVPTPEGQTPLMLASSCGNESIAYFLLQQGAELEMKDIQGWTALF
HCTSAGHQHMVRFLLDSGANANVREPICGFTPLMEAAAAGHEIIVQYFLNHGVKVDARDHSGATARMLAK
QYGHMKIVALMDTYSPSLPKSLYRSPEKYEDLSSSDESCPAPQRQRPCRKKGVSIHEGPRALARITGIGL
GGRAPRPRYEQAPPRGYVTFNSSGENPLEEEGLCCRDVTSPINERDVESSSSSSSREEHAFCANLGPVQS
SSSSEGLARAQGLSSEASVESNEDSDHACKSSARKQAKSYMKTKNPDSQWPPRAATDREGFLAESSPQTQ
RAPYSGPQDLAALLEQIGCLKYLQVFEEQDVDLRIFLTLTESDLKEIGITLFGPKRKMTSAIARWHSSAR
PPGDALELAYADRLEAEMQELAIQLHKRCEEVEATRGQVCQEQELRAVVESCLLEQDRAREDLQARLRET
WALARDAALVLDQLRACQAELSSRVRQDQPPGAATLGLAVPPADSKGWQASLQAMSLPELSGALEDRVRE
MGQALCLVTQSLEKLQVLNGKKWRET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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