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Report for CCDS10478.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10478.1 Public Homo sapiens 16 PRSS21 24 110 108 CCDS HistoryNCBI Gene:10942Re-query CCDS DB by CCDS ID:10478.1Re-query CCDS DB by GeneID:10942See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10478.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000005995.8 ENSP00000005995.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000005995.8Link to Ensembl Protein Viewer:ENSP00000005995.3Re-query CCDS DB by Nucleotide ID:ENST00000005995Re-query CCDS DB by Protein ID:ENSP00000005995
Original member Current member NCBI NM_006799.4 NP_006790.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006799.4Link to Protein Sequence:NP_006790.1Re-query CCDS DB by Nucleotide ID:NM_006799Re-query CCDS DB by Protein ID:NP_006790Link to BLAST:NP_006790.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006790.1 314 Q9Y6M0-1 314 100% 0 0

Chromosomal Locations for CCDS 10478.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2817269 2817332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2817430 2817456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2817801 2817966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2818677 2818969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2820955 2821109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2821366 2821605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGGCGCGCGCGGGGCGCTGCTGCTGGCGCTGCTGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGC
AGGAGGCGGCGCCGTTATCAGGACCATGCGGCCGACGGGTCATCACGTCGCGCATCGTGGGTGGAGAGGA
CGCCGAACTCGGGCGTTGGCCGTGGCAGGGGAGCCTGCGCCTGTGGGATTCCCACGTATGCGGAGTGAGC
CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCACTGCTTTGAAACCTATAGTGACCTTAGTGATCCCT
CCGGGTGGATGGTCCAGTTTGGCCAGCTGACTTCCATGCCATCCTTCTGGAGCCTGCAGGCCTACTACAC
CCGTTACTTCGTATCGAATATCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTG
GTGAAGCTGTCTGCACCTGTCACCTACACTAAACACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTG
AGTTTGAGAACCGGACAGACTGCTGGGTGACTGGCTGGGGGTACATCAAAGAGGATGAGGCACTGCCATC
TCCCCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAG
TACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCT
GCTTCGGTGACTCAGGTGGACCCTTGGCCTGTAACAAGAATGGACTGTGGTATCAGATTGGAGTCGTGAG
CTGGGGAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCTACACCAATATCAGCCACCACTTTGAGTGG
ATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCGCTACTCTTTTTCCCTC
TTCTCTGGGCTCTCCCACTCCTGGGGCCGGTCTGA

Translation (314 aa):
MGARGALLLALLLARAGLRKPESQEAAPLSGPCGRRVITSRIVGGEDAELGRWPWQGSLRLWDSHVCGVS
LLSHRWALTAAHCFETYSDLSDPSGWMVQFGQLTSMPSFWSLQAYYTRYFVSNIYLSPRYLGNSPYDIAL
VKLSAPVTYTKHIQPICLQASTFEFENRTDCWVTGWGYIKEDEALPSPHTLQEVQVAIINNSMCNHLFLK
YSFRKDIFGDMVCAGNAQGGKDACFGDSGGPLACNKNGLWYQIGVVSWGVGCGRPNRPGVYTNISHHFEW
IQKLMAQSGMSQPDPSWPLLFFPLLWALPLLGPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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