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Report for CCDS10276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10276.1 Public Homo sapiens 15 C15orf39 24 110 108 CCDS HistoryNCBI Gene:56905Re-query CCDS DB by CCDS ID:10276.1Re-query CCDS DB by GeneID:56905See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360639.6 ENSP00000353854.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360639.6Link to Ensembl Protein Viewer:ENSP00000353854.2Re-query CCDS DB by Nucleotide ID:ENST00000360639Re-query CCDS DB by Protein ID:ENSP00000353854
Original member Current member EBI ENST00000394987.5 ENSP00000378438.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394987.5Link to Ensembl Protein Viewer:ENSP00000378438.4Re-query CCDS DB by Nucleotide ID:ENST00000394987Re-query CCDS DB by Protein ID:ENSP00000378438
Original member Current member NCBI NM_015492.5 NP_056307.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015492.5Link to Protein Sequence:NP_056307.3Re-query CCDS DB by Nucleotide ID:NM_015492Re-query CCDS DB by Protein ID:NP_056307Link to BLAST:NP_056307.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056307.3 1047 Q6ZRI6-1 1047 100% 0 0

Chromosomal Locations for CCDS 10276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75206049 75208824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75210749 75211116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3144 nt):
ATGGCAGAGAAGCGACCCCTGAGAACCCTGGGGCCTGTGATGTATGGCAAGCTGCCCCGCTTAGAGACAG
ACTCCGGGCTCGAGCACAGCCTGCCCCACTCTGTTGGTAACCAGGATCCCTGCACCTACAAGGGGTCCTA
CTTCTCCTGCCCCATGGCAGGTACTCCTAAGGCCGAGTCTGAGCAGTTGGCGTCCTGGACCCCATACCCA
CCCTTGTACTCTACCGGTATGGCAGGACCCCCACTTCAGGCAGACAACCTGCTGACCAACTGCCTGTTCT
ACCGCTCGCCAGCAGAAGGCCCTGAGAAGATGCAGGACTCCAGCCCTGTTGAGCTCCTGCCCTTCAGTCC
CCAGGCTCACTCCTACCCAGGCCCACCACTGGCAGCACCCAAACCTGTCTACCGCAACCCTCTGTGCTAT
GGGCTCTCAACTTGTCTGGGGGAAGGAGCAGTGAAGAGGCCACTGGATGTTGACTGGACTCTGGCGACTG
GGCCCCTGTTGCCCTCAGCTGACCCACCCTGCTCTCTGGCCCCAGCTCCTAGCAAGGGCCAGACTCTGGA
TGGCACCTTCTTGCGGGGGGTGCCAGCTGAGGGGTCCAGTAAAGACTCCTCAGGGAGCTTCTCCCCATGC
CAGCCCTTCCTGGAGAAATATCAGACCATCCACAGCACGGGCTTCCTGGCCTCCAGGTACACAGGTCCTT
ACCCTAGGAACTCCAAGCAAGCAATGTCTGAGGGGCCCTCAAGTCCTTGGACCCAGCTGGCCCAGCCCCT
GGGGCCACCCTGTCAGGACACCGGGCCCACCCACTACCCACCACCCCACCACCCACCACCCCACCCTCCA
CAGGCCCTGCCTTGCCCTCCAGCCTGTCGCCACCCAGAGAAGCAGGGCAGCTACAGCCCAGCACTCCCAC
TGCAGCCTCTGGGGGGCCACAAGGGGACCGGGTACCAGGCTGGTGGGCTGGGCAGCCCCTACCTGAGGCA
GCAGGCAGCCCAGGCACCTTACATTCCCCCACTGGGGCTGGACGCTTACCCCTACCCCTCTGCCCCTCTC
CCAGCACCCTCTCCAGGCCTCAAGCTGGAGCCGCCTCTCACTCCACGGTGCCCATTGGACTTTGCCCCCC
AGACACTGAGTTTTCCTTATGCCCGGGATGACCTCTCTCTCTATGGAGCATCCCCTGGGCTTGGAGGGAC
ACCACCTTCCCAGAACAATGTGCGGGCTGTGCCACAGCCTGGTGCCTTCCAGAGGGCATGCCAGCCTTTG
CCAGCGAGCCAGCCCTGCTCAGAGCCTGTGAGGCCTGCACAGGAAGCCGAAGAGAAGACCTGGCTGCCCA
GCTGCAGGAAAGAGAAGCTCCAGCCCCGGCTCAGTGAGCACTCTGGGCCGCCCATCGTCATCCGAGACAG
TCCAGTTCCCTGTACCCCCCCAGCACTGCCCCCCTGTGCCCGGGAGTGCCAGTCTCTTCCACAGAAGGAG
GGCGCAAGGCCACCCAGCTCTCCACCAATGCCTGTCATTGACAATGTCTTCAGCCTGGCCCCCTACCGTG
ACTATCTGGATGTGCCGGCACCCGAGGCCACAACTGAGCCTGACTCTGCCACAGCTGAGCCTGACTCAGC
CCCAGCCACCAGTGAAGGTCAGGACAAAGGCTGCAGGGGGACCCTGCCTGCCCAGGAGGGCCCCTCAGGG
AGTAAACCCCTAAGGGGCTCACTTAAGGAGGAGGTAGCCCTGGATTTGAGTGTGAGGAAGCCCACAGCAG
AGGCCTCCCCTGTCAAGGCTTCCCGTTCTGTGGAGCATGCCAAGCCTACTGCAGCCATGGATGTGCCAGA
TGTGGGCAACATGGTGTCAGATCTGCCAGGCCTGAAAAAGATAGACACAGAAGCACCAGGCTTGCCTGGG
GTGCCAGTGACCACAGATGCCATGCCAAGGACCAACTTCCACAGCTCTGTGGCCTTCATGTTCCGAAAGT
TCAAGATCCTCCGTCCGGCACCTTTGCCTGCAGCCGTGGTCCCGTCCACGCCCACCTCAGCTCCTGCTCC
CACACAGCCTGCACCCACCCCCACATCTGGGCCCATTGGACTGCGGATTCTCGCTCAACAGCCCTTGTCT
GTGACCTGCTTCAGCCTGGCACTGCCCAGCCCTCCAGCCGTAGCTGTGGCCTCCCCTGCCCCTGCTCCAG
CTCCATCCCCTGCTCCGGCTCGAGCTCAGGCTCCAGCTTCAGCCCGGGATCCAGCTCCAGCTCCAGCTCC
AGTTGCAGGCCCTGCTCCAGCATCTACTTCAGCCCCAGGGGACTCCCTGGAGCAGCATTTTACAGGACTA
CATGCGTCCCTGTGTGATGCTATTTCTGGCTCCGTCGCCCACTCTCCTCCAGAGAAGCTTCGCGAGTGGC
TAGAGACGGCTGGGCCCTGGGGCCAGGCTGCGTGGCAGGACTGCCAGGGTGTGCAGGGGCTGCTGGCCAA
GCTGCTGTCTCAGCTGCAGCGCTTCGATCGCACCCACCGGTGCCCCTTCCCCCATGTGGTGCGAGCTGGC
GCCATCTTCGTGCCCATTCACCTGGTGAAGGAGCGGCTCTTCCCTCGGCTGCCACCCGCTTCTGTGGACC
ATGTGCTGCAGGAGCATCGTGTGGAGCTGCGGCCCACCACGCTGTCGGAGGAGCGGGCACTGCGGGAGCT
CGCCCTGCCAGGCTGCACCTCACGCATGCTGAAGTTACTGGCGCTGCGCCAGCTGCCGGACATTTACCCC
GACCTTCTCGGCCTGCAGTGGCGCGACTGTGTACGCCGCCAGCTGGGTGACTTTGACACTGAGGCTGGAG
CTGTGTCCTCCTCAGAGCCCACTGTGGCCAGAGGTGAGCCAGAGAGCCTAGCCCTGGCTCAGAAGTCACC
GGCCCCCAAGGTCAGGAAGCCAGGCAGGAAGCCACCAACCCCTGGCCCGGAGAAAGCAGAGGCAGCTGCT
GGGGAAGAGTCCTGTGGTGCCTCCCCTACCCCTGCTACCAGTGCCAGCCCACCTGGCCCCACACTGAAGG
CCCGCTTCCGCAGTCTGCTGGAGACCGCCTGGCTCAATGGCCTGGCTCTGCCCACCTGGGGCCACAAGTC
CTCAAGACCAGACCAGCCCTCACCCTGCCCACAGCTGCTGGACAGCCAGAGCCATCACCTGTAG

Translation (1047 aa):
MAEKRPLRTLGPVMYGKLPRLETDSGLEHSLPHSVGNQDPCTYKGSYFSCPMAGTPKAESEQLASWTPYP
PLYSTGMAGPPLQADNLLTNCLFYRSPAEGPEKMQDSSPVELLPFSPQAHSYPGPPLAAPKPVYRNPLCY
GLSTCLGEGAVKRPLDVDWTLATGPLLPSADPPCSLAPAPSKGQTLDGTFLRGVPAEGSSKDSSGSFSPC
QPFLEKYQTIHSTGFLASRYTGPYPRNSKQAMSEGPSSPWTQLAQPLGPPCQDTGPTHYPPPHHPPPHPP
QALPCPPACRHPEKQGSYSPALPLQPLGGHKGTGYQAGGLGSPYLRQQAAQAPYIPPLGLDAYPYPSAPL
PAPSPGLKLEPPLTPRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPPSQNNVRAVPQPGAFQRACQPL
PASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPIVIRDSPVPCTPPALPPCARECQSLPQKE
GARPPSSPPMPVIDNVFSLAPYRDYLDVPAPEATTEPDSATAEPDSAPATSEGQDKGCRGTLPAQEGPSG
SKPLRGSLKEEVALDLSVRKPTAEASPVKASRSVEHAKPTAAMDVPDVGNMVSDLPGLKKIDTEAPGLPG
VPVTTDAMPRTNFHSSVAFMFRKFKILRPAPLPAAVVPSTPTSAPAPTQPAPTPTSGPIGLRILAQQPLS
VTCFSLALPSPPAVAVASPAPAPAPSPAPARAQAPASARDPAPAPAPVAGPAPASTSAPGDSLEQHFTGL
HASLCDAISGSVAHSPPEKLREWLETAGPWGQAAWQDCQGVQGLLAKLLSQLQRFDRTHRCPFPHVVRAG
AIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERALRELALPGCTSRMLKLLALRQLPDIYP
DLLGLQWRDCVRRQLGDFDTEAGAVSSSEPTVARGEPESLALAQKSPAPKVRKPGRKPPTPGPEKAEAAA
GEESCGASPTPATSASPPGPTLKARFRSLLETAWLNGLALPTWGHKSSRPDQPSPCPQLLDSQSHHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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