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Report for CCDS10214.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10214.1 Public Homo sapiens 15 DIS3L 24 110 108 CCDS HistoryNCBI Gene:115752Re-query CCDS DB by CCDS ID:10214.1Re-query CCDS DB by GeneID:115752See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10214.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319194.9 ENSP00000321583.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000319194.9Link to Ensembl Protein Viewer:ENSP00000321583.5Re-query CCDS DB by Nucleotide ID:ENST00000319194Re-query CCDS DB by Protein ID:ENSP00000321583
Original member Current member NCBI NM_001323936.2 NP_001310865.1 Accepted alive Link to Nucleotide Sequence:NM_001323936.2Link to Protein Sequence:NP_001310865.1Re-query CCDS DB by Nucleotide ID:NM_001323936Re-query CCDS DB by Protein ID:NP_001310865Link to BLAST:NP_001310865.1
Original member Current member NCBI NM_001323945.2 NP_001310874.1 Accepted alive Link to Nucleotide Sequence:NM_001323945.2Link to Protein Sequence:NP_001310874.1Re-query CCDS DB by Nucleotide ID:NM_001323945Re-query CCDS DB by Protein ID:NP_001310874Link to BLAST:NP_001310874.1
Original member Current member NCBI NM_133375.5 NP_588616.1 Accepted alive Link to Nucleotide Sequence:NM_133375.5Link to Protein Sequence:NP_588616.1Re-query CCDS DB by Nucleotide ID:NM_133375Re-query CCDS DB by Protein ID:NP_588616Link to BLAST:NP_588616.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001310865.1 971 Q8TF46-4 971 100% 0 0
NP_001310874.1 971 Q8TF46-4 971 100% 0 0
NP_588616.1 971 Q8TF46-4 971 100% 0 0

Chromosomal Locations for CCDS 10214.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 66295098 66295141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66306824 66306952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66308709 66308844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66311724 66311900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66314039 66314117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66315036 66315215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66318449 66318618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66320571 66320732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66322687 66322934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66323493 66323585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66325831 66326364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66328970 66329124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66329221 66329399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66331875 66332020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66332736 66332910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66333004 66333312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2916 nt):
ATGCAGACAGCTTGTCAAGCTGTGCAGCATCAAAGAGGCAGGAGACAGTATAACAAACTGCGAAACCTGC
TGAAGGATGCGCGTCATGATTGCATTCTCTTTGCTAATGAATTCCAGCAATGCTGCTATCTGCCACGGGA
AAGAGGAGAGTCCATGGAGAAGTGGCAGACCAGGAGCATATACAACGCAGCTGTTTGGTACTATCATCAC
TGCCAGGACAGGATGCCAATTGTTATGGTGACAGAAGATGAAGAGGCAATTCAGCAGTATGGAAGTGAAA
CAGAAGGAGTATTCGTGATTACTTTCAAGAATTACCTGGACAATTTCTGGCCTGATTTAAAAGCTGCCCA
CGAGCTTTGTGATTCTATCCTTCAGTCTCGACGGGAGAGAGAGAATGAGAGTCAGGAGAGCCATGGGAAG
GAGTACCCAGAACATCTTCCCCTGGAAGTGTTAGAAGCTGGGATTAAATCTGGACGCTATATCCAGGGAA
TTCTGAATGTCAACAAACACAGAGCCCAAATAGAAGCTTTTGTTCGACTTCAAGGAGCCAGCAGTAAAGA
TTCAGATTTAGTCAGTGACATCCTAATCCACGGGATGAAGGCTCGAAACCGCTCAATTCATGGAGATGTG
GTAGTTGTGGAGCTGCTTCCTAAAAATGAATGGAAAGGAAGAACCGTAGCCCTGTGTGAGAATGACTGTG
ACGACAAGGCTTCGGGCGAGTCCCCAAGTGAGCCCATGCCTACAGGTCGAGTGGTGGGCATACTTCAGAA
GAACTGGCGGGATTATGTGGTGACATTTCCGTCCAAAGAAGAGGTCCAATCTCAGGGCAAAAATGCTCAG
AAAATCCTGGTTACACCTTGGGATTACAGAATTCCCAAAATTCGAATTAGCACTCAGCAAGCAGAAACCC
TCCAGGACTTCAGGGTGGTCGTGCGCATCGATTCCTGGGAGTCAACATCTGTGTATCCAAATGGACATTT
TGTGCGTGTTTTAGGAAGAATCGGAGATCTGGAAGGGGAAATTGCAACCATCCTGGTGGAAAACAGTATT
TCAGTTATTCCTTTCTCAGAAGCTCAGATGTGTGAGATGCCAGTAAACACACCAGAAAGTCCCTGGAAGG
TGAGTCCTGAAGAGGAACAAAAACGTAAAGACTTGAGGAAAAGCCATCTCGTATTCAGCATTGACCCCAA
AGGTTGTGAAGATGTGGATGACACACTCTCAGTCAGAACCTTAAATAATGGCAACCTGGAACTTGGGGTC
CACATCGCAGATGTAACACACTTTGTGGCACCAAATTCTTACATTGATATTGAAGCTAGAACAAGGGCCA
CCACTTATTATCTAGCAGATCGTCGCTATGACATGCTGCCTTCCGTCCTCAGTGCAGATTTGTGTTCCCT
TCTGGGAGGCGTTGATAGGTATGCTGTAAGCATCATGTGGGAACTGGATAAAGCCTCTTATGAAATTAAG
AAAGTGTGGTATGGCAGAACCATTATTCGATCAGCATACAAACTGTTCTATGAAGCAGCCCAAGAACTAC
TGGATGGAAACTTAAGCGTTGTTGATGATATTCCAGAATTCAAAGACTTGGATGAGAAGAGCAGACAAGC
CAAGCTGGAGGAGTTGGTGTGGGCAATTGGAAAGCTGACCGACATAGCTCGCCATGTCAGAGCTAAACGA
GACGGATGTGGTGCCCTGGAACTGGAAGGGGTAGAGGTTTGCGTACAGCTAGATGACAAAAAGAACATTC
ACGACCTCATCCCCAAGCAGCCCCTGGAAGTCCACGAGACAGTGGCTGAATGCATGATCCTGGCCAACCA
CTGGGTCGCCAAAAAGATCTGGGAGAGCTTCCCTCATCAGGCCTTGCTGCGCCAGCACCCTCCTCCACAC
CAGGAGTTCTTTTCAGAACTCCGGGAATGTGCTAAAGCCAAAGGCTTCTTCATAGATACACGGTCCAATA
AAACACTGGCTGATTCTCTGGATAATGCGAACGACCCCCACGATCCCATTGTGAACAGGCTACTGCGCTC
CATGGCCACGCAGGCCATGTCGAATGCTCTGTACTTCTCCACCGGATCCTGTGCGGAGGAGGAGTTCCAT
CATTACGGTCTTGCATTAGATAAATATACCCACTTTACTTCTCCAATAAGAAGATATTCAGATATTGTAG
TACACCGCTTGTTAATGGCAGCCATTTCAAAAGATAAGAAAATGGAAATTAAGGGAAATCTGTTCAGCAA
CAAAGATCTTGAGGAATTATGCAGACATATCAACAACAGAAACCAAGCAGCACAGCATTCTCAGAAGCAG
TCTACTGAGCTCTTCCAGTGCATGTACTTCAAAGACAAAGACCCTGCCACCGAGGAGCGTTGCATATCTG
ACGGAGTTATTTATTCAATTAGAACAAATGGTGTGCTTCTATTTATACCAAGGTTTGGGATTAAAGGTGC
TGCTTATCTAAAAAATAAAGATGGTTTAGTCATCTCATGTGGCCCAGATAGCTGTTCTGAATGGAAACCA
GGATCCCTTCAACGATTTCAAAACAAAATTACCTCTACTACAACAGATGGGGAATCTGTTACGTTCCATT
TGTTTGACCATGTAACCGTAAGAATATCCATACAGGCCTCACGTTGCCATTCTGATACAATCAGACTTGA
AATAATTAGTAACAAACCATACAAGATACCAAATACAGAACTTATTCATCAGAGTTCCCCCTTGCTGAAG
AGTGAGTTAGTGAAAGAAGTAACTAAATCTGTGGAAGAAGCTCAGCTTGCCCAAGAAGTCAAAGTAAACA
TCATTCAGGAGGAATATCAAGAATATCGCCAAACAAAGGGAAGGAGCCTATACACACTTCTAGAGGAGAT
ACGGGACCTAGCTCTCCTGGATGTTTCAAACAATTATGGAATATGA

Translation (971 aa):
MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSIYNAAVWYYHH
CQDRMPIVMVTEDEEAIQQYGSETEGVFVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGK
EYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDILIHGMKARNRSIHGDV
VVVELLPKNEWKGRTVALCENDCDDKASGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQ
KILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSI
SVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGV
HIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIK
KVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKR
DGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPH
QEFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFH
HYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQ
STELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKP
GSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISNKPYKIPNTELIHQSSPLLK
SELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYRQTKGRSLYTLLEEIRDLALLDVSNNYGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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