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Report for CCDS1010.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1010.1 Public Homo sapiens 1 CRNN 24 110 108 CCDS HistoryNCBI Gene:49860Re-query CCDS DB by CCDS ID:1010.1Re-query CCDS DB by GeneID:49860See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1010.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000271835.3 ENSP00000271835.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000271835.3Link to Ensembl Protein Viewer:ENSP00000271835.3Re-query CCDS DB by Nucleotide ID:ENST00000271835Re-query CCDS DB by Protein ID:ENSP00000271835
Original member Current member NCBI NM_016190.3 NP_057274.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016190.3Link to Protein Sequence:NP_057274.1Re-query CCDS DB by Nucleotide ID:NM_016190Re-query CCDS DB by Protein ID:NP_057274Link to BLAST:NP_057274.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057274.1 495 Q9UBG3 495 100% 0 0

Chromosomal Locations for CCDS 1010.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 152409594 152410943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 152412096 152412233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGCCTCAGTTACTGCAAAACATTAATGGGATCATCGAGGCCTTCAGGCGCTATGCAAGGACGGAGGGCA
ACTGCACAGCGCTCACCCGAGGGGAGCTGAAAAGACTCTTGGAGCAAGAGTTTGCCGATGTGATTGTGAA
ACCCCACGATCCAGCAACTGTGGATGAGGTCCTGCGTCTGCTGGATGAAGACCACACAGGGACTGTGGAA
TTCAAGGAATTCCTGGTCTTAGTGTTTAAAGTTGCCCAGGCCTGTTTCAAGACACTGAGCGAGAGTGCTG
AGGGAGCCTGCGGCTCTCAAGAGTCTGGAAGCCTCCACTCTGGGGCCTCGCAGGAGCTGGGCGAAGGACA
GAGAAGTGGCACTGAAGTGGGAAGGGCGGGGAAAGGGCAGCATTATGAGGGGAGCAGCCACAGACAGAGC
CAGCAGGGTTCCAGAGGGCAGAACAGGCCTGGGGTTCAGACCCAGGGTCAGGCCACTGGCTCTGCGTGGG
TCAGCAGCTATGACAGGCAAGCTGAGTCCCAGAGCCAGGAAAGAATAAGCCCGCAGATACAACTCTCTGG
GCAGACAGAGCAGACCCAGAAAGCTGGAGAAGGCAAGAGGAATCAGACAACAGAGATGAGGCCAGAGAGA
CAGCCACAGACCAGGGAACAGGACAGAGCCCACCAGACAGGTGAGACTGTGACTGGATCTGGAACTCAGA
CCCAGGCAGGTGCCACCCAGACTGTGGAGCAGGACAGCAGCCACCAGACAGGAAGAACCAGCAAGCAGAC
ACAGGAGGCCACCAATGACCAGAACAGAGGGACTGAGACCCACGGTCAAGGCAGGAGCCAGACCAGCCAG
GCTGTGACAGGAGGACATGCTCAGATACAGGCAGGGACACACACCCAGACACCCACCCAGACCGTGGAGC
AGGACAGCAGCCACCAGACAGGAAGCACCAGCACCCAGACACAGGAGTCCACCAATGGCCAGAACAGAGG
GACTGAGATCCACGGTCAAGGCAGGAGCCAGACCAGCCAGGCTGTGACAGGAGGACACACTCAGATACAG
GCAGGGTCACACACCGAGACTGTGGAGCAGGACAGAAGCCAAACTGTAAGCCACGGAGGGGCTAGAGAAC
AGGGACAGACCCAGACGCAGCCAGGCAGTGGTCAAAGATGGATGCAAGTGAGCAACCCTGAGGCAGGAGA
GACAGTACCGGGAGGACAGGCCCAGACTGGGGCAAGCACTGAGTCAGGAAGGCAGGAGTGGAGCAGCACT
CACCCAAGGCGCTGTGTGACAGAAGGGCAGGGAGACAGACAGCCCACAGTGGTTGGTGAGGAATGGGTTG
ATGACCACTCAAGGGAGACAGTGATCCTCAGGCTGGACCAGGGCAACTTGCATACCAGTGTTTCCTCAGC
ACAGGGCCAGGATGCAGCCCAGTCAGAAGAGAAGCGAGGCATCACAGCTAGAGAGCTGTATTCCTACTTG
AGAAGCACCAAGCCATGA

Translation (495 aa):
MPQLLQNINGIIEAFRRYARTEGNCTALTRGELKRLLEQEFADVIVKPHDPATVDEVLRLLDEDHTGTVE
FKEFLVLVFKVAQACFKTLSESAEGACGSQESGSLHSGASQELGEGQRSGTEVGRAGKGQHYEGSSHRQS
QQGSRGQNRPGVQTQGQATGSAWVSSYDRQAESQSQERISPQIQLSGQTEQTQKAGEGKRNQTTEMRPER
QPQTREQDRAHQTGETVTGSGTQTQAGATQTVEQDSSHQTGRTSKQTQEATNDQNRGTETHGQGRSQTSQ
AVTGGHAQIQAGTHTQTPTQTVEQDSSHQTGSTSTQTQESTNGQNRGTEIHGQGRSQTSQAVTGGHTQIQ
AGSHTETVEQDRSQTVSHGGAREQGQTQTQPGSGQRWMQVSNPEAGETVPGGQAQTGASTESGRQEWSST
HPRRCVTEGQGDRQPTVVGEEWVDDHSRETVILRLDQGNLHTSVSSAQGQDAAQSEEKRGITARELYSYL
RSTKP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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